Species Tissue CellType Marker Resource Mouse Trachea Basal cell Krt14, Krt5, Krt15, Sostdc1, Trp63 32286221, 30283141, 30069046, 30069044 Mouse Trachea Ciliated cell Foxj1, Foxn4, Shisa8, Sntn 32286221, 30283141, 30069046, 30069044 Mouse Trachea Endothelial cell Pecam1, Cd34, Cdh5, Lyve1 32286221, 30283141, 31288631 Mouse Trachea Epithelial cell Cdh1, Epcam 32286221, 30283141, 30069046 Mouse Trachea Fibroblast Col1a2, Dcn, Ddr2, Pdgfra, Timp2, Twist2 32286221, 31288631 Mouse Trachea Ionocyte Ascl3, Asgr1, Atp6v0d2, Atp6v1e1, Cd81, Cftr, Foxi1, Gnas, Iqgap1, Ldhb, Moxd1, P2ry14, Parm1, Rasd1, Rbpms, Slc12a2, Stap1, Tfcp2l1 30069044 Mouse Trachea Mesenchymal cell Col1a1, Col8a1, Pdgfra, Pdgfrb 30283141 Mouse Trachea Mesenchymal stem cell Cd34, Clec3b, Thy1, Wnt2 32286221 Mouse Trachea Neuroendocrine cell Cck, Chga, Mpz, Plp1, Syp, Tubb3 32286221, 30283141, 30069046, 30069044 Mouse Trachea Pericyte Acta2, Myh11, Notch3, Rgs5 32286221 Mouse Trachea Schwann cell Chga, Mpz, Plp1, Tubb3 32286221 Mouse Trachea Smooth muscle cell Acta2, Bpifa1, Cnn1, Crip1, Cytl1, Fabp4, Gm13889, Ifitm1, Il6, Mustn1, Myh11, Notch3, Plac9, Rgs5, Tagln, Tg 32286221, 31288631, 34411694 Mouse Trachea Tracheobronchial chondrocyte Acan, Col2a1, Sox9 32286221