Species	Tissue	CellType	Marker	Resource
Mouse	Spleen	B cell	Cd19, Cd79a, Cd22, Cd24a, Cd69, Cd72, Cd74, Cd79b, Cdk6, Cxcl10, Fasn, Fcmr, Ifi47, Ifit1, Ifit2, Ifit3, Igtp, Irf7, Irgm1, Isg15, Isg20, Ly6d, Mx1, Myc, Mzb1, Oasl1, Parp14, Plac8, Ptprc, Rgs1, Rsad2, Usp18	30283141, 30413361, 34763332, 32086381, 31751331, 33004416, 35112806, 31754020, 33857287, 34429969, Company, 29373896, 24052571, 24531970
Mouse	Spleen	B-1 B cell	Zbtb20, Zbtb32	34762705
Mouse	Spleen	CD4-positive helper T cell	Cd3d, Cd3e, Cd3g, Cd4, Ptprc	Company
Mouse	Spleen	CD4-positive, alpha-beta T cell	Cd3d, Cd4	31754020
Mouse	Spleen	CD4-positive, CD25-positive, alpha-beta regulatory T cell	Cd3d, Cd3e, Cd3g, Cd4, Il2ra, Nrp1, Ptprc	34429969, Company
Mouse	Spleen	CD8-positive, alpha-beta cytotoxic T cell	Cd3d, Cd3e, Cd3g, Cd8a, Ptprc	Company
Mouse	Spleen	CD8-positive, alpha-beta memory T cell	Arl4c, Gzmm, Klra6, Tnfsf8, Trdc	31751331
Mouse	Spleen	CD8-positive, alpha-beta T cell	Cd3d, Cd8a, Nkg7	31754020, 34429969
Mouse	Spleen	Centroblast	Aicda, Bcl6, Mki67	34161770
Mouse	Spleen	Classical monocyte	Ccl9, Ccr2, Cd68, Ly6c2	34763332
Mouse	Spleen	Common lymphoid progenitor	Flt3, Il7r	33004416
Mouse	Spleen	Conventional dendritic cell	Apobec1, Cd209d, Cd33, Chil3, Clec4a1, Itgam, Sirpa, Sox4	33997687
Mouse	Spleen	Dendritic cell	Irf8, Itgax, Bex6, Cd19, Cd209a, Cd3d, Cd3e, Cd3g, Cd74, Cd83, Cd86, Ffar2, H2-Aa, H2-Ab1, H2-DMb1, H2-Eb1, Haus8, Ifi205, Ifit1, Ifit2, Itgam, Klrb1c, Ly6g, MHC class II, Ppp1r14a, Rsad2, S100a4, Ube2e2, Xcr1	29474909, 34763332, 31751331, 35112806, 35243819, 33857287, 34429969, Company, 27832135, 26627738
Mouse	Spleen	Erythroid progenitor cell	Ly76, Tfrc	21847081
Mouse	Spleen	Fibroblast	Birc5, Cdca3, Pclaf, Tk1	34429969
Mouse	Spleen	Follicular B cell	Fcer2a, Ighd	34762705
Mouse	Spleen	Germinal center B cell	Aicda, Fasn, IgD family, Mki67, Pclaf, Prss57, Ube2c	34762705, 19716372
Mouse	Spleen	Granulocyte	Itgam, Ly6g, Ccr3, Cd19, Cd24a, Cd3d, Cd3e, Cd3g, Clcf1, Itga2, Klrb1c, Ly6c1, Siglecf	29474909, 30413361, 31751331, 33857287, Company, 26627738
Mouse	Spleen	Hematopoietic stem cell	Atxn1, Ly6a	30413361
Mouse	Spleen	Immature B cell	Ly6d	33004416
Mouse	Spleen	Immature neuron	Dcx, Mapt, Sox11	34764950
Mouse	Spleen	Macrophage	Adgre1, Cd68, Chil3, Itgam, Ly6g, Ace, Adgre5, Blvrb, C1qa, C1qb, C1qc, Cd19, Cd3d, Cd3e, Cd3g, Cd7, Cd86, Cd8a, Cebpb, Crip2, Csf1r, Cxcl10, Fcgr1, Ftl1-ps1, Gatm, Gbp2, Hbb-bt, Ifi27l2a, Ifitm6, Klrb1c, Lipc, Ly6c1, Nop16, Pf4, Plac8, Serpinb6a, Thbs1, Trf	29474909, 31751331, 35112806, 31754020, 34429969, Company, 22213571, 17187680, 16364031, 9498754, 7590892, 24531970, 26627738
Mouse	Spleen	Marginal zone B cell of spleen	Cr2, Ccr2, Cd24a, Cd40lg, Cd81, Fcer2a, Hes1, IgD family, Ly96	30283141, 29474909, 31751331, 34762705, 25015269
Mouse	Spleen	Mature B cell	Igkc	33004416
Mouse	Spleen	Mature naive B cell	Cd40lg, Cr2, Fcer2a	19716372
Mouse	Spleen	Mature NK T cell	Klrb1c, Cd160, Nkg7, Cd3d, Cd3e, Cd3g, Fcgr3, Ncam1, Ptprc	30737144, 33900375, 31751331, Company
Mouse	Spleen	Memory T cell	Cd3d, Cd4, Cd44, Foxp3, Id2, Xcl1	30737144, 31754020
Mouse	Spleen	Migratory dendritic cell	Bcl2l14, Cacnb3, Ccl22, Fscn1	34429969
Mouse	Spleen	Monocyte	Ccr2, Cd14, Ly6c1, Csf1r, Itgam, Ly6g, Cd19, Cd36, Cd3d, Cd3e, Cd3g, Cd74, Dpep2, Fcgr1, Klrb1c, Ly6a, Ly6c2, Lyz1, Lyz2, S100a8, S100a9, Scarb1	29474909, 32086381, 31751331, 35243819, 33997687, 33857287, 34429969, Company, 22213571, 24531970, 26627738
Mouse	Spleen	Mononuclear phagocyte	Adgre1, Cd209a, Cd68, Clec9a, Cx3cr1, Itgax	35112806
Mouse	Spleen	Myeloid suppressor cell	Camp, Chil3, Ltf, Ly6c2, Ly6g, S100a8, Wfdc21	34763332, 32086381
Mouse	Spleen	Naive T cell	Il7r, Lef1, Ms4a4b, Sell, Tcf7	35354645, 34429969
Mouse	Spleen	Naive thymus-derived CD4-positive, alpha-beta T cell	Igfbp4, Izumo1r, Ly6c1	31751331
Mouse	Spleen	Natural killer cell	Klrb1c, Ncr1, Klrg1, Cd27, Itgam, Gzma, Eomes, Klrb1b, Klre1, Klrk1, Nkg7, Ccl5, Cited4, Commd10, Dusp2, Il18rap, Itga2, Khdc1a, Klra1, Klra7, Klrb1a, Klrd1, Mrpl28, Ntpcr, Prf1, Rhoc, S1pr5, Xcl1	34764950, 29474909, 30413361, 34763332, 31751331, 35348580, 35112806, 34429969, Company, 24531970
Mouse	Spleen	Neutrophil	Ly6g, Cxcr2, S100a8, Apobr, Ccl6, Cxcl2, Cxcr4, Hdc, Il1b, Isg15, Notch2, Retnlg, Rsad2, S100a9, Wfdc21	29474909, 34763332, 32086381, 31751331, 35112806, 35243819, 34429969, 22213571, 11591793
Mouse	Spleen	Non-classical monocyte	Csf1r, Cx3cr1, Fabp4	34763332
Mouse	Spleen	Plasma cell	Sdc1, Jchain, Ighm	29474909, 34763332, 31751331, 35112806, 34762705, 19716372
Mouse	Spleen	Plasmablast	Irf4, Prdm1, Sdc1, Slpi	34161770
Mouse	Spleen	Plasmacytoid dendritic cell	Pacsin1, Siglech, Bst2, Ccr9, D13Ertd608e, Tcf4	31751331, 33997687, 34429969, 24531970
Mouse	Spleen	Preadipocyte	Ccn1, Col3a1, Gas1, Igfbp3, Mgp	34429969
Mouse	Spleen	Precursor B cell	Il2ra, Rag1	33004416
Mouse	Spleen	Pro-B cell	Dntt, Il7r, Rag1	33004416
Mouse	Spleen	Regulatory B cell	Apoe, Ccdc28b, Ccnd2, Ccr1, Cd300lf, Cd9, Cr2, Csf2rb, Fcrl5, Mzb1, Pdia4, Plac8, Ptpn22, Rilpl2, Rplp0, S100a6, Slc7a7, Sp140, Zbtb20	34594327
Mouse	Spleen	Regulatory T cell	Cd4, Foxp3, Il2ra, Itga2	30737144, 26590312
Mouse	Spleen	T cell	Cd3d, Cd3e, Cd3g, Cd4, Cd8a, Cd247, Thy1, Cd2, Cd5, Cd8b1, Itgb3, Ptprc, Sell	29474909, 30413361, 34763332, 32086381, 31751331, 35112806, Company, 11145690, 1909300, 25338846, 8562871, 8407056, 2045127
Mouse	Spleen	T follicular helper cell	Izumo1r, Nt5e	24030473
Mouse	Spleen	T-helper 2 cell	Il1rl1	11207266
Mouse	Spleen	T1 B cell	Cd40lg, Cr2, Fcer2a	25015269
Mouse	Spleen	Transitional stage B cell	Ighd, Ly6d, Vpreb3	33004416, 34762705
Mouse	Spleen	Tumor-associated macrophage	Ccl8, Siglec1	34429969
Mouse	Spleen	Type 1 conventional dendritic cell	Cadm1, Clec9a, Irf8, Xcr1	33997687
Mouse	Spleen	Type 2 conventional dendritic cell	Cd209a, Ccr6, Cd7, Clec10a, Clec12a, Ctnnd2, Dtx1, Epcam, Flt3, Il4i1, Ltb, Relb, Tcf7, Tnf, Zeb2	33997687, 34429969