Species	Tissue	CellType	Marker	Resource
Mouse	Retina	Acinar cell	Pax6	34364890
Mouse	Retina	Adventitial cell	Acta2, Cspg4, Des, Myh11, Myl9, Pdgfrb	31843893
Mouse	Retina	Amacrine cell	Gad1, Slc6a9, Pax6, Prox1, Tfap2a, Ebf1, Gad2, Slc32a1, Tfap2b, Calb1, Calb2, Calr, Chat, Ebf3, Fzd3, Kif2c, Lhx1, Lims1, Lrrn3, Mark2, Npy, Nrxn2, Onecut1, Onecut2, Prdm13, Ptf1a, Pvalb, Slc17a8, Slc6a1, Stx1a, Stx1b, Th	31843893, 29474909, 34143204, 33674409, 34686336, 32313077, 32457074, 31775049, 32734440, 28529477
Mouse	Retina	Astrocyte	Gfap, Aqp4, Glul, Vim, Acsbg1, Aldh1l1, Aldoc, Apoe, Aspg, Cd44, Clu, Cxcl10, Dbi, Fgfr3, Gja1, Gjb6, Gli3, Hspb1, Lcn2, Ntsr2, Osmr, Pak3, Pax2, Pbxip1, Pdgfra, Ptn, Rfx4, Rlbp1, S100b, S1pr3, Serpina3n, Slc1a2, Slc1a3, Steap4, Timp1	31843893, 29474909, 34364890, 32457074, 32734440, 34259628, 32404418
Mouse	Retina	B cell	Cd19, Cd2, Cd22, Cd24a, Cr2, Emx1, Gsx2, Hopx, Ms4a1, Notum, Pax6	31843893, 34259628
Mouse	Retina	Bipolar neuron	Vsx2, Cabp5, Otx2, Col11a1, Gad1, Grik1, Grm6, Hcn1, Irx6, Isl1, Kcng4, Lhx3, Neto1, Pax6, Slc1a2, Slc6a9, Tacr3, Tfap2a, Vsx1	29474909, 34686336, 34364890, 32313077, 32457074, 32734440
Mouse	Retina	CD4-positive, alpha-beta T cell	Ccr7, Cd3e, Cd4, Cd44, Cd69, Il6ra, Lef1, S1pr1	31843893
Mouse	Retina	CD8-positive, alpha-beta T cell	Cd3e, Cd8a, Cd8b1	31843893
Mouse	Retina	Cone retinal bipolar cell	Scgn, Serpini1, Sox6, Vsx1, Cck, Chrm2, Cnmd, Cpne9, Erbb4, Fezf2, Glra1, Grik1, Gsg1, Igfn1, Irx6, Isl1, Lhx4, Lrrtm1, Nnat, Opn1mw, Otx2, Prkar2b, Slitrk5, Trpm1, Vsx2, Zfhx4	31843893, 33674409, 34364890, 31775049
Mouse	Retina	Dendritic cell	Ccr7, Clec9a, Dpp4, Flt3, Itgae, Itgax, Zbtb46	31843893, 20435601
Mouse	Retina	Effector T cell	Cd247, Cd4, S1pr1	31843893
Mouse	Retina	Endothelial cell	Pecam1, Cldn5, Angpt2, Bmx, Cdh5, Cspg4, Ecscr, Flt1, Gja4, Kdr, Mcam, Mmrn1, Nos3, Robo4, Tek, Tie1, Vwf	32457074, 31775049, 32734440, 32404418
Mouse	Retina	Endothelial cell of vascular tree	Pecam1, Cdh5, Cldn5, Erg, Flt1, Kdr, Tek, Vwf	31843893, 29474909, 33674409, 34364890
Mouse	Retina	Excitatory neuron	Slc17a7	32404418
Mouse	Retina	Fibroblast	Aebp1, Clec3b, Col13a1, Col14a1, Col1a1, Cxcl14, Cygb, Dcn, Itga8, Lbh, Meg3, Meox2, Mmp3, Neat1, Npnt, Nr2f2, Pi16, Prrx1, Rtp4, S100a4, Tbx2, Tcf21, Vim	29474909, 32734440
Mouse	Retina	Glial cell	Glul	32075759
Mouse	Retina	Inflammatory macrophage	Cd74, Ctsc, H2-Aa, H2-Ab1, H2-DMb1, H2-Eb1, Il1b, Tgfbi	30890724, 32734440
Mouse	Retina	Inhibitory interneuron	Gad1	32404418
Mouse	Retina	Macrophage	Adgre1, Aif1, Cd74, Fcrls, H2-Aa, Hexb, P2ry12, Slc2a5, Tmem119, Trem2	31843893, 30890724, 20435601
Mouse	Retina	Mature NK T cell	Cd3e, Cd8a, Cd8b1, Klra1, Klra6	31843893
Mouse	Retina	Microglial cell	Cx3cr1, Aif1, Tmem119, Crybb1, P2ry12, Trem2, Adora3, Astn1, Bcl2a1a, Cd74, Csf1r, Cst7, Gpr34, Hexb, Iba1, Lpl, Mertk, Olfml3, P2ry13, Ptprc, Rspo1, Serpine2, Siglech, Tyrobp	31843893, 29474909, 33674409, 30890724, 34686336, 34364890, 32457074, 31775049, 32734440, 32075759, 32404418
Mouse	Retina	Monocyte	Ccr2, Ly6c2, Acp5, Apoe, Ccl2, Csf1r, Cx3cr1, Itgax, Lgals3, Lyz2, Mrc1, Ms4a7	31843893, 30890724, 32734440
Mouse	Retina	Mueller cell	Rlbp1, Glul, Apoe, Aqp4, Dkk3, Gfap, Gpr37, Hes1, Pax6, Slc1a3, Vsx2, Acsl3, Aldh1l1, Car14, Car2, Clu, Col9a1, Dbi, Dtx2, Itm2b, Notch1, Pdgfra, Ptn, Rax, S100b, Slc17a3, Sparc, Spc25, Vim	31843893, 29474909, 33674409, 34686336, 34364890, 32313077, 32457074, 31775049, 32734440
Mouse	Retina	Natural killer cell	Ncr1, Cd3d, Cd3e, Cd3g, Klra1, Klra6, Klrb1a, Klrb1b, Klrb1c, Klrb1f, Klrc2, Klrd1, Klrk1, Nkg7	31843893, 32734440
Mouse	Retina	Neural progenitor cell	Atoh7, Neurog2, Sstr2	34040115
Mouse	Retina	Neuron	Tubb3, Cabp5, Dcx, Elavl3, Elavl4, Ntng1, Otx2, Pou4f1, Pou4f2, Pou4f3, Trhde	34686336, 35998637, 32075759, 34259628
Mouse	Retina	Oligodendrocyte	Olig1	32404418
Mouse	Retina	Pericyte	Kcnj8, Pdgfrb, Abcc9, Acta2, Angpt1, Anpep, Cd248, Cd44, Cspg4, Des, Dlk1, Mcam, Nt5e, Pdlim1, Rgs5	29474909, 33674409, 34364890, 32457074, 31775049, 32734440
Mouse	Retina	Photoreceptor cell	Crx, Otx2, Arr3, Gnat2, Gngt2, Nrl, Opn1mw, Opn1sw, Pdc, Pde6h, Prdm1, Rxrg, Thrb	34143204, 34040115, 31260032, 32313077
Mouse	Retina	Photoreceptor precursor cell	Crx, Otx2	34040115
Mouse	Retina	Plasma cell	Cd24a, Il6ra, Jchain, Prdm1, Sdc1, Tnfrsf17	31843893
Mouse	Retina	Progenitor cell	Fgf15, Vsx2, Ascl1, Dll1, Pax6, Sox2	34143204, 34040115, 32075759, 34259628
Mouse	Retina	Regulatory T cell	Cd4, Foxp3, Il10, Il2ra, Tgfb1	31843893
Mouse	Retina	Resting microglial cell	P2ry12, Tmem119	30890724
Mouse	Retina	Retina horizontal cell	Lhx1, Prox1, Calb1, Onecut1, Pax6, Calb2, Ebf1, Gja10, Onecut2, Prdm13, Ptf1a, Tfap2a, Tfap2b	31843893, 29474909, 34143204, 33674409, 34686336, 32457074, 31775049, 32734440
Mouse	Retina	Retinal cone cell	Arr3, Gnat2, Opn1mw, Opn1sw, Cabp5, Pde6h, Rxrg, Thrb	31843893, 29474909, 31260032, 32457074, 31775049, 32734440
Mouse	Retina	Retinal ganglion cell	Pou4f1, Pou4f2, Rbpms, Isl1, Thy1, Opn4, Pou4f3, Sncg, Tubb3, Fst, Isl2, Jam2, Nrn1, Pde1a, Runx1, Slc17a6, Sox11, Sox12, Sox4, Trhr, Zic1, 1700015G11Rik, 1700121l03Rik, 4833423e24Rik, 6430573F11Rik, 9530077C05Rik, A130014A01Rik, A730046J19Rik, Abcc8, Adam7, Adamts2, Adamts5, Adcyap1, Adgrg2, Adgrg6, Adgrl2, Adora2a, Aga, Agmat, Aldh1l1, Aldh6a1, Alkal2, Amigo2, Angpt1, Apela, Arhgap22, Arhgap27os2, Arhgap31, Arhgef26, Armc2, Arsj, Atp2a1, Atp6v1c2, Avil, Barhl1, Bbox1, Bco2, Bend4, Boc, C1galt1, C1ql2, Calcb, Car2, Car3, Cartpt, Casp4, Ccdc153, Ccer2, Cd9, Cdh9, Cdk15, Cenpv, Cfap206, Cfap77, Cfp, Chia1, Chrna5, Chrnb4, Cklf, Ckm, Cldn11, Clec10a, Cmbl, Cnih3, Col12a1, Col13a1, Col19a1, Col23a1, Col28a1, Col5a2, Colq, Crb3, Creb3l2, Creb5, Crym, Csrp3, Cthrc1, Cyr61, Cys1, D630033o11Rik, D7Ertd443e, Dab2, Dapk2, Dcn, Dennd2a, Dgkh, Drd5, Edn1, Egln3, Elmo3, Eomes, Erbb4, Esrrb, Etnppl, Eya2, Fam129a, Fam19a4, Fam89a, Fam92b, Fancg, Fes, Fgd2, Fmo1, Foxp2, Frk, Frmpd3, Gas1, Gfra3, Gjc1, Gm10631, Gm11100, Gm765, Gmip, Gna14, Gpc3, Gpc6, Gpr101, Gpr39, Gpr6, Gpr83, Gprc5c, Gpsm2, Gpx6, Grb7, H2-Dmb1, H2-Dmb2, Hcrtr2, Heatr1, Hes1, Hist1h1c, Hmcn1, Hr, Hrk, Hs3st3b1, Hsd11b2, Htr2a, Itgb5, Jhy, Kcng1, Kcns1, Kcns3, Kif26a, Kit, Krt81, Lacc1, Lct, Lhx9, Lima1, Lims2, Lingo4, Lmo2, Lmo7, Lrrc32, Lyve1, Mapk4, Mc4r, Mef2c, Met, Mfng, Misp, Mkrn2os, Mmp14, Mmp17, Mmp2, Morc4, Mst1r, Muc15, Myl4, Mylk, Myo18b, Nab2, Nectin4, Nek7, Neto1, Neurod2, Neurod6, Nfia, Nhlh1, Nnmt, Npr1, Npy, Nr0b1, Nr3c2, Nrg1, Ntf3, Ntn1, Nts, Nxph4, Oas1e, Onecut3, Otos, Oxtr, Pabpc1l, Palmd, Pamr1, Pappa2, Pax6, Pcdh20, Pcgf5, Pdzk1ip1, Peli2, Piezo2, Pifo, Pip5k1b, Pkib, Pknox2, Plch2, Plpp3, Pm20d2, Podn, Postn, Prdm16, Prkcg, Prokr1, Prox1, Prps2, Ptgfr, Ptgs1, Ptpn22, Ptprt, Qrfpr, Rabl3, Rbfox3, Rbm20, Rgcc, Rgs16, Rhoj, Rnase12, Rrad, Runx2, Saa2, Satb2, Scn7a, Scube2, Serpinb12, Serpinb1b, Sez6, Shisa2, Shisa6, Sipa1l2, Skap1, Slc16a9, Slc22a3, Slc35f2, Slc35f3, Slc4a4, Slc7a11, Slc7a3, Slitrk1, Sntn, Snx31, Snx7, Snx9, Sostdc1, Sox9, Spata13, Spon1, Spp1, Sst, Sstr2, St18, Steap1, Stra6, Stum, Stxbp6, Synpo, Tagln2, Tbr1, Tcf7l2, Tcim, Tfap2d, Tg, Tgfb2, Tgfb3, Tgm6, Thbd, Tiparp, Tmem184a, Tmprss7, Tnfrsf11b, Tpbgl, Traf3ip3, Trappc3l, Trarg1, Ttn, Tubb6, Tusc5, Ulk4, Unc5b, Urb2, Uts2b, Vcan, Vit, Wfdc1, Wisp1, Wnt11, Wnt8b, Zfp385b, Zic2, Zic4	31843893, 30018341, 29474909, 34143204, 33674409, 34040115, 34686336, 34364890, 35998637, 31260032, 31784286, 32457074, 31775049, 32734440, 33712461
Mouse	Retina	Retinal pigment epithelial cell	Rpe65, Best1, Bmp4, Krt18, Lrat, Ptgds, Rbp1, Rdh10, Rdh5, Rlbp1, Ttr, Tyrp1	34364890, 32734440
Mouse	Retina	Retinal progenitor cell	Fut4	31260032, 16499901
Mouse	Retina	Retinal rod cell	Rho, Gnat1, Nrl, Nr2e3, Cnga1, Cngb1, Cplx4, Gabrr2, Mef2c, Nxnl1, Pdc, Pde6a, Rbp3, Rcvrn	31843893, 29474909, 33674409, 32313077, 31775049, 32734440, 32075759
Mouse	Retina	Rod bipolar cell	Prkca, Sebox, Vstm2b, Car8, Grm6, Otx2, Vsx2, Adarb2, App, Casp7, Isl1, Nrl, Pcdh8, Pcp2, Prdm8, Ryr3, Trpm1	31843893, 33674409, 34364890, 32313077, 31775049
Mouse	Retina	Rod photoreceptor precursor cell	Nt5e	24638161
Mouse	Retina	T cell	Cd3d, Cd3e, Cd3g, Cd4, Cd8a, Cd8b1, Foxp3, Il2, Klrc2, Klrd1, Klrk1, Ncr1, Nkg7	31843893, 32734440
Mouse	Retina	T follicular helper cell	Bcl6, Cd4, Cd40lg, Cxcr5, Il21, Il4	31843893
Mouse	Retina	T-helper 1 cell	Cd4, Cxcr6, Ifng, Stat4, Tbx21, Tnf	31843893
Mouse	Retina	T-helper 17 cell	Cd4, Il17a, Il17f, Rorc, Stat3	31843893
Mouse	Retina	Type 1 cone bipolar cell (sensu Mus)	Kcnip3, Tacr3	30934054