Species	Tissue	CellType	Marker	Resource
Mouse	Lung	Activated B cell	Cd24a, Cd79b, Fcer2a, Ms4a1, Tagln2	35724763, 34135870
Mouse	Lung	Activated CD4-positive, alpha-beta T cell	Ifng, Rora	35732116
Mouse	Lung	Activated CD8-positive, alpha-beta T cell	Ifng, Rora	35732116
Mouse	Lung	Adventitial fibroblast	Entpd2, Pi16, Serpinf1	34030460, 33208946, 34523259
Mouse	Lung	Alternatively activated macrophage	Arg1, Il10, Mrc1, Cd163	25038765, 29722542, 28101568, 27895424, 27729414
Mouse	Lung	Alveolar capillary type 2 endothelial cell	Ednrb, Car4, Prx, Tbx2	34030460, 33208946, 33599610
Mouse	Lung	Alveolar macrophage	Itgax, Siglecf, Marco, Adgre1, Itgam, Ear1, Ear2, Fcgr1, Ccna2, Cd200r1, Cd68, Chil3, H2-Ab1, Mc1r, Mrc1, Msr1, Pclaf, Ptprc, Siglece	34030460, 30283141, 29474909, 33208946, 32461220, 32678092, 30554520, 35213222, 33692365, 34523259, 34389631, 35739565, 34292313, 35724763, 31601718, 31391335, 34375314, 34314387, 25170302, 23672262, 29733312
Mouse	Lung	Alveolar type 2 fibroblast cell	Mfap4	30318149
Mouse	Lung	Anterior foregut endoderm cell	Cpm	25241738
Mouse	Lung	B cell	Cd19, Cd79a, Ms4a1, Cd79b, Ighd, Igkc, Ly6d, Bank1, Cd22, Ebf1, Fcer2a, Fcmr, Ighm, Pax5, 4930426D05Rik, Atl2, Bend5, Blk, Blnk, Cables2, Ccr6, Cd74, Cr2, Cxcr5, Egr4, Fcrl1, Gm11690, Gm30211, Gm31243, H2-Aa, H2-Ab1, Irgc1, Mef2c, Mzb1, Pick1, Pou2af1, Ptprc, Rab30, Ralgps2, Rasgrp3, Rrp1b, Scd1, Shisa8, Siglecg, Snn, Spg11, Spib, Srpk3, St8sia6, Tnfrsf13c, Trim7, Vpreb3, Zfp267, Zfp574	34030460, 33577605, 29474909, 33208946, 32269339, 35569056, 32461220, 30848683, 30979687, 32678092, 30554520, 32425701, 35213222, 33692365, 34523259, 34373258, 35892659, 35967301, 33599610, 35739565, 32317643, 30318149, 35724763, 35732116, 36039299, 34051097, 31601718, 31391335, 34375314, 35920332, 35675777, 34314387
Mouse	Lung	B-1 B cell	Cd27, Cd5, Spn	35724763
Mouse	Lung	Basal cell	Krt5, Trp63, Dapl1, Aqp3, Col17a1, Fn1, Hspa1a, Krt8, Vim	34030460, 33208946, 33187367, 32461220, 33259798, 30069044, 35724763, 30135312, 30913038
Mouse	Lung	Basophil	Cpa3, Il6, Mcpt8, Ms4a2, Ccl3, Ccl4, Cd200r3, Cd69, Fcer1a, Gata2	29474909, 33208946, 30979687, 30554520, 33692365, 33599610, 30318149, 31601718, 34375314, 34314387
Mouse	Lung	Blood vessel endothelial cell	Vcam1, Vwf	33754492, 34528097
Mouse	Lung	Bronchioalveolar stem cells	Stmn1, Tuba1b, Tubb5, Ube2c	35627266
Mouse	Lung	Brush cell	Rgs13	30069044, 30069046
Mouse	Lung	Capillary endothelial cell	Car4, Cdh5, Gpihbp1, Pecam1, Aplnr, Cd93, Edn1, Efna1, Kdr, Kit, Nrp1, Plvap, Prx, Sema3c, Sema3g, Sgk1, Tek	34030460, 33208946, 33754492, 32678092, 35879310, 35213222, 33692365, 32059779, 34375314, 34314387
Mouse	Lung	CD103-positive dendritic cell	Cd24a, Clec9a, Itgae, 0610040J01Rik, 2310031A07Rik, 2310040G24Rik, 2610037D02Rik, 4930455G09Rik, A630072M18Rik, Acss1, Acvrl1, Adam19, Adk, Adora3, Adrb2, Agpat3, Alms1, Ank2, Ankrd12, Anpep, Antxr2, Anxa1, Anxa6, Ap1s3, Arap1, Arhgap18, Arhgap5, Arid3b, Arl4a, Arpin, Arrdc3, Arsb, Asap2, Atg9b, Atp6v0a2, Atp8b4, Aurkb, Barx2, Bbc3, BC028528, Bckdhb, Bcl2l14, Bst1, Btla, Cacna1s, Cadm1, Camk1d, Ccr2, Cd180, Cd200, Cd207, Cd226, Cd36, Cd37, Cd81, Cd99l2, Cdk14, Cenpv, Cfh, Cgref1, Chpf, Cibar1, Ckb, Cldn1, Cldn7, Clec12a, Clnk, Col23a1, Coro7, Cpq, Crybg1, Csprs, Cst3, Ctdp1, Ctla2b, Cuedc1, Cxcr3, Cyb5a, Cyb5r1, Cyfip2, Cyp8b1, Cystm1, Dbn1, Dennd2d, Dkk3, Dnase1l3, Dusp10, Dynlt1a, Dynlt1c, Ece1, Egfl8, Emp2, Endod1, Enpp4, Evl, F2rl2, Fam149a, Fbxo4, Fbxw17, Fchsd2, Fcrla, Ffar4, Fgd2, Fgl2, Flt3, Fmnl2, Fnbp1, Fndc7, Fzd1, Gadd45a, Gas7, Gatm, Gcsam, Gm11837, Gm1965, Gm3336, Gm9530, Gna15, Gnb4, Gng12, Gpr141b, Gpr157, Gpr33, Gpr65, Gramd2, Gramd3, Grap, Gucy2c, H2-Ab1, Hacd3, Havcr2, Hepacam2, Hes1, Hmces, Hmgn3, Homer2, Hps3, Hps4, Id2, Ifi205, Ifi211, Ift172, Igf2r, Ildr1, Inpp1, Ipcef1, Iqsec1, Irf8, Itga1, Itga8, Itgal, Itgam, Itgax, Itpripl1, Jaml, Kctd14, Kif23, Kif5a, Klf2, Klhl6, Klra3, Krtcap3, Laptm4b, Lemd2, Lima1, Lmna, Lpar3, Lpar6, Lpcat1, Lrba, Lrrc1, Lrrk2, Lsr, Ly75, Lyz1, Map4k5, Mboat1, Mctp1, Met, Mfsd14a, Mllt3, Mmp19, Morc2a, Mospd1, Mpeg1, Mpzl2, Mtmr10, Mxi1, Mycl, Myo6, Myo9a, Naaa, Naalad2, Naga, Nav2, Ncoa7, Ndufaf6, Nek6, Net1, Notch4, Osbpl3, Otof, P2ry10b, P2ry14, P3h2, Pafah1b3, Pbx1, Pcdh7, Pde1b, Pde8a, Pdia5, Pglyrp1, Phf11c, Phka2, Phlda1, Pi4k2a, Pianp, Pik3cb, Pir, Plaat3, Plbd1, Plcb4, Plce1, Plekho2, Plin2, Plp2, Plpp1, Plxdc1, Polr1a, Ppfibp2, Ppm1m, Ppt1, Ppt2, Proser2, Prr5, Prr5l, Prr7, Psap, Psen2, Psmb9, Ptger2, Ptprc, Rab11fip4, Rab19, Rab30, Rab32, Rab39, Rab43, Rab7b, Rabgap1l, Rasgrp3, Rgs10, Rhobtb1, Rnase6, Rnf144b, Rnf157, Rtl8a, Rtl8b, Scgb1a1, Sec24d, Selenoi, Sema4c, Septin1, Septin3, Septin6, Serpinb6b, Serpinb8, Serpinf1, Sestd1, Sftpa1, Sftpb, Sftpc, Sgk1, Sgms1, Sgsm3, Sh3tc1, Shtn1, Siglech, Sigmar1, Slc11a1, Slc12a9, Slc22a18, Slc25a20, Slc31a2, Slc45a2, Slc46a3, Slc8b1, Slc9a3r2, Slc9a7, Slc9a9, Slco3a1, Smagp, Snap47, Snx22, Snx29, Spef1l, St3gal5, Stbd1, Strbp, Strip2, Stx17, Sult1a1, Sv2b, Syne1, Tanc1, Tbc1d10c, Tbc1d8, Tcf19, Tespa1, Timd4, Timeless, Tlr11, Tlr12, Tlr3, Tmem38b, Tmem42, Tmtc3, Tnfsf13b, Tnni2, Tpst2, Tram2, Treml4, Trim35, Trim7, Trpm2, Tsc22d3, Tshz1, Ttc39a, Tubb2a, Txndc15, Ubash3b, Unc119b, Vrk2, Vwa1, Vwf, Wdfy4, Wdr86, Xcr1, Xlr, Zbtb8a, Zcchc4, Zdhhc2, Zfp157, Zfp276, Zfp282, Zfp318, Zfp367, Zfp398, Zfp84, Zfp946	33208946, 32269339, 29733312
Mouse	Lung	CD11b-positive dendritic cell	Itgam, Fcgr1, Sirpa, 2310022A10Rik, 2900026A02Rik, 3110082I17Rik, 4833407H14Rik, 6330418K02Rik, A530064D06Rik, AA467197, Abca9, Abcg1, Abcg3, Abi3, Acp5, Acsl1, Ada, Adam15, Adam23, Adap1, Adgre1, Adgre4, Adora2b, AI839979, Akr7a5, Alox5, Ank, Ankrd37, Anxa3, Aopep, Aplp2, Apobec1, Arap2, Arid5a, Arl5c, Arl8b, Asgr2, Atf3, Atp2a3, Axl, B3gnt8, B430306N03Rik, B4galt1, B4galt6, Bach1, Bcl11a, Bcl2, Bcl2l11, Bcl3, Bend4, Bex6, Bhlhe40, Bin1, Blnk, Blvrb, C130050O18Rik, C1qa, C1qb, C1qc, C3ar1, Calhm6, Camk1, Camkk1, Camkk2, Capg, Car2, Casp4, Casp8, Ccl17, Ccl2, Ccl3, Ccl4, Ccl6, Ccl9, Ccnd2, Ccr1, Ccr7, Ccrl2, Cd14, Cd163, Cd164, Cd200r1, Cd209a, Cd209b, Cd209c, Cd209d, Cd24a, Cd274, Cd300a, Cd300ld, Cd300lf, Cd33, Cd40, Cd63, Cd69, Cd7, Cd72, Cd80, Cdh1, Cdh17, Cdkn1a, Cebpb, Cers6, Cfp, Chn2, Chst7, Cib1, Cib2, Cish, Ckap4, Clec10a, Clec2i, Clec4a1, Clec4a2, Clec4a3, Clec4b1, Clec4n, Clec5a, Coq10b, Cox6b2, Creb5, Crtc3, Csf1r, Csf2rb, Csf2rb2, Csrnp1, Ctnnd2, Ctsa, Ctsd, Ctsh, Ctsl, Ctss, Cx3cr1, Cxcl10, Cxcl2, Cxcr4, Cybb, Cyp4f16, Cyp4f18, Cyp7b1, Cyria, D16Ertd472e, D930030I03Rik, Dab2, Dcstamp, Ddit4, Ddr1, Ddt, Ddx58, Depdc7, Dexi, Dgat1, Dhcr24, Dhx40, Dnmt3a, Dok2, Dok3, Dusp1, Dusp5, Dynlt2b, Ear2, Edem1, Egr2, Ehf, Emb, Emilin2, Emp1, Eng, Eno1, Eno1b, Ets2, Etv3, Eva1b, Evi5, Fabp5, Fam107b, Fam217b, Fam3c, Fcer1g, Fcgr2b, Fcgr3, Fcho2, Fcor, Fcrls, Ffar2, Fgr, Fh1, Flrt3, Fn1, Fosb, Fosl2, Frrs1, Fut7, Gadd45b, Gadd45g, Galnt6, Gapt, Gbp2, Gbp3, Gbp7, Gch1, Gcnt1, Gcnt2, Gda, Gem, Gfra2, Gga2, Ggh, Ggt5, Glipr2, Gm15987, Gm20186, Gm5547, Gm7676, Gm9733, Gngt2, Gpnmb, Gpr141, Gpr160, Gpr18, Gsg1, H2-Ab1, H2-DMb2, H2-Oa, Hacd1, Hacd4, Hif1a, Hilpda, Hlx, Hpgd, Htra3, I830077J02Rik, Ier3, Ifi27, Ifi27l2a, Ifi30, Ifi47, Ifit1, Ifit3, Ifitm1, Ifitm2, Ifitm3, Ifitm6, Igsf6, Il17ra, Il18rap, Il1b, Il1r2, Il1rl1, Il1rl2, Il1rn, Il21r, Il2rg, Il4i1, Il4ra, Il7r, Irf4, Isg15, Isg20, Itgax, Jak3, Jchain, Junb, Kcne3, Kdm6b, Klf9, Klk8, Klrd1, Klri2, Kynu, Lair1, Lamp1, Lgals8, Lgals9, Lgmn, Lifr, Lilra6, Lilrb4a, Lilrb4b, Limd2, Lmo2, Lpp, Lrp1, Lst1, Lta4h, Ltb, Ltc4s, Ly6a, Ly6i, Ly86, Lysmd2, Mafb, Malt1, Man1a, Man2a2, Map3k14, Mapkapk3, Matk, Mcemp1, Mdh2, Mgat4a, Mgl2, Micu1, Milr1, Mmp12, Mpc1, Mrc1, Ms4a4b, Ms4a4c, Ms4a6b, Ms4a6c, Ms4a6d, Msrb1, Mt1, Mt2, Mtss1, Mvb12b, Mvd, Mxd1, Mycbp2, Myo1e, N4bp3, Napsa, Nceh1, Ncf2, Nedd4, Nfe2l2, Nfil3, Nfkbid, Nfkbiz, Ngfr, Nr4a2, Nr4a3, Nrip1, Nupr1, Oas1a, Oasl2, Osm, Pacc1, Pald1, Panx1, Pcyt1a, Pdcd1lg2, Pfkfb4, Pgghg, Pilra, Pilrb1, Pilrb2, Pim1, Pim3, Pira2, Pkig, Plac8, Plaur, Pld3, Plekhg2, Plgrkt, Plk2, Plpp2, Pltp, Plxdc2, Plxna1, Plxna4os1, Plxnb2, Plxnc1, Plxnd1, Por, Pou2f2, Ppdpf, Ppp1r14a, Ppp1r1a, Pram1, Prkcb, Prkce, Ptafr, Ptger3, Ptgr1, Ptgs2, Ptpn1, Ptpn4, Ptprc, Pvr, Pxdc1, Pycard, Pygl, Rab20, Rab3il1, Rac2, Ramp3, Rarg, Rasgef1b, Rasgrp1, Rel, Relb, Rell1, Relt, Rftn1, Rgs1, Rgs12, Rhoc, Rhoh, Rilpl2, Ripk2, Rnf149, Rps6ka4, Rras2, Rsad2, Rtp4, Runx1, S100a4, S100a6, S100a8, S100a9, Samsn1, Sdc4, Sdhaf4, Selenop, Serpinb1a, Sesn2, Sh2d1b1, Sh3bp2, Sidt2, Siglece, Sirpb1a, Sirpb1c, Skint3, Slamf9, Slc14a1, Slc15a3, Slc16a3, Slc16a6, Slc2a1, Slc2a3, Slc2a6, Slc43a2, Slc44a2, Slc48a1, Slc7a11, Slc7a5, Smim5, Smox, Socs2, Socs3, Sorl1, Spns3, Ssh1, Ssh2, St6galnac6, St8sia6, Stard9, Stat4, Stk17b, Stxbp6, Sulf2, Syk, Tagap, Tank, Tbc1d16, Tcea3, Tceal8, Tcn2, Tent5a, Tep1, Tgm2, Ticam2, Timp1, Timp2, Tm7sf3, Tmcc3, Tmem176a, Tmem176b, Tmem185b, Tmem273, Tmem88, Tmem97, Tnf, Tnfaip2, Tnfaip3, Tnfrsf12a, Tnfrsf1b, Tnfrsf9, Tnfsf12, Tnfsf9, Tnip3, Tpp1, Trappc5, Trem1, Treml2, Trim16, Trim47, Trp53i11, Trp53i13, Trps1, Tspan32, Tyrobp, Ubtd1, Uck2, Upb1, Vav2, Vdr, Vopp1, Wfdc17, Wls, Xdh, Zbtb18, Zeb2, Zeb2os, Zfp36	33208946, 32269339, 29733312
Mouse	Lung	CD4-positive helper T cell	Cd3d, Cd3e, Cd3g, Cd4, Cd44, Il2ra	31231035
Mouse	Lung	CD4-positive, alpha-beta T cell	Cd4, Cd3e, Lck	33208946, 33692365, 35732116, 34375314, 32878747
Mouse	Lung	CD4+ IFN- responsive T cell	Igtp, Stat1	35732116
Mouse	Lung	CD8-positive, alpha-beta cytotoxic T cell	Cd8a	34030460, 35724763
Mouse	Lung	CD8-positive, alpha-beta T cell	Cd8a, Cd3e, Cd8b1, Lck	33208946, 33692365, 35732116
Mouse	Lung	Centroblast	Aicda, Bcl6, Mki67	34161770
Mouse	Lung	Ciliated cell	Foxj1, 1110017D15Rik, Ccdc153, Cdhr3, Ccdc113, Ccdc17, Ccdc78, Cd24a, Dnali1, Dynlrb2, Fam183b, Lztfl1, Mlf1, Scgb1a1, Tmem212, Tppp3	30283141, 29474909, 33208946, 33187367, 32461220, 33692365, 30069044, 35724763, 31601718, 35627266, 24739965
Mouse	Lung	Classical monocyte	Cd14, F13a1, Ly6c1, Ly6c2	34030460, 33208946, 32678092, 30554520, 34413303, 31601718, 34375314, 34314387
Mouse	Lung	Club cell	Scgb1a1, Cyp2f2, Scgb3a2, Scgb3a1, Aldh1a1, Bpifa1, Cbr2, Cckar, Chad, Foxj1, Gabrp, Hp, Krt15, Lypd2, Muc5b, Retnla, Sftpb, Wfdc2	29474909, 33208946, 33187367, 32461220, 30848683, 32678092, 30554520, 32425701, 33692365, 30069044, 32877222, 35892659, 35739565, 30318149, 35724763, 36039299, 30135312, 31601718, 35627266, 30913038, 9070353, 26702074, 25533958, 23621375, 28458456, 11724907, 10457010, 8609367, 24739965
Mouse	Lung	Conventional dendritic cell	Itgax, Ccl22, Cd209a, Cd68, Cd74, Dpp4, Fscn1, Gngt2, H2-Eb1, H2-M2, Itgam, Itgb2, Kmo, Lst1, Nudt17, Plac8, Syngr2, Zbtb46	34030460, 29474909, 34413303
Mouse	Lung	Dendritic cell	Itgax, Cd209a, Itgae, Siglech, Ccl17, Cd74, H2-Ab1, H2-Eb1, Aif1, Bst2, Ccr7, Ccr9, Cd24a, Cd68, Cd86, Cd8a, Clec9a, Cxcl16, H2-Aa, H2-DMb1, H2-DMb2, Irf8, Naaa, Pacsin1, Ptprc, Tcf4, Tlr9	33577605, 30283141, 29474909, 33208946, 30848683, 30979687, 32678092, 30554520, 32425701, 35213222, 33692365, 34523259, 34389631, 33079726, 35892659, 35967301, 33599610, 32317643, 30318149, 36039299, 34051097, 31601718, 31391335, 34375314, 34314387, 22811544, 28337868, 15255967
Mouse	Lung	Dividing dendritic cell	Ccnb2, Cd74, H2-Aa, H2-Ab1, Naaa	29474909
Mouse	Lung	Double-positive, alpha-beta thymocyte	Cd4, Cd8a	33959105
Mouse	Lung	Effector CD4-positive, alpha-beta T cell	Cd4, Cd44	33959105
Mouse	Lung	Effector CD8-positive, alpha-beta T cell	Cd44, Cd8a, Ctla2a, Cxcr3	33959105, 35732116
Mouse	Lung	Endothelial cell	Cdh5, Pecam1, Kdr, Cldn5, Vwf, Eng, Flt1, Car4, Clec14a, Ly6a, Plvap, Tmem100, Tspan7, Cavin2, Cd24a, Cd34, Clic5, Cthrc1, Cyp4b1, Cyyr1, Dleu7, Edn1, Eln, Emcn, Emp2, Epas1, Erg, Ets1, Fbln5, Gata2, Gpihbp1, Hopx, Hpgd, Icam2, Igfbp7, Krt19, Lrg1, Ly6c1, Lypd2, Lyve1, Mcam, Pltp, Pmp22, Prox1, Prss23, Sftpa1, Sftpb, Sftpc, Sftpd, Tek, Timp3, Tinagl1, Tm4sf1, Tmem252, Vcam1	34030460, 30283141, 29474909, 32461220, 33754492, 30848683, 32295886, 32678092, 30554520, 32425701, 35213222, 35252804, 33692365, 34523259, 32059772, 35892659, 35967301, 33599610, 31288631, 33705684, 32317643, 30318149, 35724763, 36039299, 31601718, 34808254, 34528097, 34375314, 30913038, 35920332, 34314387, 27584018, 26600239, 29590628
Mouse	Lung	Endothelial cell of artery	Gja5, Bmx, Cdh5, Cxcl12, Dkk2, Hey1, Mgp, Pecam1	34030460, 33208946, 33754492, 35213222, 33692365, 32059779, 32059772
Mouse	Lung	Endothelial cell of lymphatic vessel	Prox1, Ccl21a, Cdh5, Lyve1, Mmrn1, Pdpn, Pecam1, Thy1	34030460, 33208946, 32461220, 33754492, 32678092, 33692365, 32059779, 33599610, 34528097, 34375314, 35294950
Mouse	Lung	Endothelial cell of vascular tree	Cdh5, Cldn5, Col15a1, Pecam1, Vwa1	34030460, 32678092, 35294950
Mouse	Lung	Eosinophil	Adgre1, Ccr3, Prg2, Siglecf, Cd14, Cd80, Clec4d, Ear2, Fas, G0s2, Icam1, Il5, Itgav, Rnase2a, Rnase2b, S100a8, S100a9, Sell	29474909, 35569056, 32213713, 35724763, 34051097, 23672262, 10725452
Mouse	Lung	Epithelial cell	Epcam, Cdh1, Scgb1a1, Foxj1, Sftpc, 1110017D15Rik, Ager, Aldh1a2, Anpep, Ccr10, Cd1d1, Cd44, Cdkn1a, Cdkn1b, Ifngr1, Il1a, Il1b, Il6, Itga2, Krt18, Krt5, Krt8, Muc5b, Pdpn, Scgb3a2, Sftpb, Sntn, Tgfb1, Tlr2, Tnf	34030460, 32425701, 35252804, 34523259, 34373258, 35967301, 32317643, 30318149, 34051097, 30135312, 30913038, Company, 23769046, 22911824, 20228843, 12727849, 28180137, 26574781, 11748835, 1394139, 26600239, 28886383
Mouse	Lung	Erythroblast	Alas2, Gypa, Hba-a2	35892659, 33599610
Mouse	Lung	Erythrocyte	Hba-a1, Hba-a2, Hbb-bs, Hbb-bt	32269339, 36039299
Mouse	Lung	Fibroblast	Col1a1, Col1a2, Col3a1, Pdgfra, Plin2, Dcn, Mgp, Acta2, Col13a1, Fabp5, Gpx3, Gsn, Mfap4, Abcg1, Bgn, Ccl2, Ccl6, Cd81, Ddr2, Dpp4, Ear1, Ear2, Fabp1, Fabp4, Fgf10, Fgfr4, G0s2, Grem1, Il1b, Inmt, Krt79, Lipa, Lpl, Mrc1, Pcolce2, Pi16, Plet1, Pparg, Rarres2, Saa3, Slc38a5, Slc7a10, Sparc, Tagln, Tcf21, Thy1, Timp2, Vim, Wnt2, Wnt5a	34030460, 33208946, 33187367, 32461220, 30848683, 32678092, 30554520, 35213222, 33692365, 34523259, 35892659, 35967301, 31288631, 35739565, 33290280, 35933397, 30318149, 35724763, 36039299, 34151224, 31601718, 34375314, 30913038, 35920332, 29590628, 26511927, 22268140, 26600239
Mouse	Lung	Fibrocyte	Ccn2, Cd34, Col1a2, Fn1, Lum, Pdgfra, Postn	33033147
Mouse	Lung	Gamma-delta T cell	Trgc1	34030460, 33692365, 33959105, 34375314, 34314387
Mouse	Lung	Goblet cell	Muc5b, Tff2, Muc5ac, Scgb3a1, Spdef, Bpifb1, Chil4, Clca1, Gabrp, Gp2, Reg3g	33208946, 32678092, 32425701, 30069044, 32877222, 35724763, 35627266, 25533958
Mouse	Lung	Granulocyte	Mpo, Ccl12, Csf3r, Cxcr2, Ifng, Il6, S100a8, S100a9, Tnf	32678092, 35967301, 33033147, 26676260
Mouse	Lung	Granulocyte monocyte progenitor cell	Ctsg, Elane, Mpo, Ms4a3, Prtn3	29474909
Mouse	Lung	Helper T cell	Cd4, Cd3d, Cd3e, Cd3g, Cd44	34030460, 31231035, 35724763
Mouse	Lung	Ig-producing B cell	Igha, Ighm, Igkc, Igkv2-109, Jchain	29474909
Mouse	Lung	Inflammatory macrophage	Nos2, Tnf, Ccr7, Cd40, Cxcl2, Il12a, Il12b, Irf5	35724763, 28101568, 27895424
Mouse	Lung	Intermediate monocyte	Cd14, Itgax, Treml4	33208946, 34375314
Mouse	Lung	Lipid-associated macrophage	Trem2	34389631
Mouse	Lung	Lung ciliated cell	Foxj1, Ccdc113, Ccdc39, Dnaaf3, Epcam	34030460, 32678092, 33259798, 30554520, 32425701, 32877222, 33599610, 30318149, 31601718, 30913038
Mouse	Lung	Macrophage	Adgre1, Cd68, Chil3, Lyz2, Cx3cr1, Mrc1, Apoe, Arg1, Itgax, C1qa, Cd14, Fcgr1, Itgam, Axl, C1qb, C1qc, Ccl6, Cd9, Csf1r, Ctsb, Ctss, Cxcl2, Ear2, H2-Aa, Lpl, Lst1, Ly6c2, Marco, Retnla, 1700017B05Rik, A930007I19Rik, Abca1, Abcc3, Abcc5, Abcd2, Abhd12, Abhd5, Abr, Acod1, Acp2, Acp5, Adam17, Adam9, Adap2os, Adgre4, Adssl1, Agtrap, Ahnak2, AI504432, Aifm2, Alas1, Aldh3b1, Amdhd2, Angptl4, Aoah, Aopep, Ap3s1, Ap5s1, Apobec1, Appl2, Aprt, Arg2, Arhgap10, Arhgap19, Arhgap24, Arid5b, Arl11, Asns, Atp13a2, Atp1a3, Atp6v0d2, Atp6v1a, Atp6v1c1, Atp6v1e1, AU020206, B3gnt7, B3gnt8, Bex1, Bhlhe41, Blnk, Blvrb, Bst1, C3, C3ar1, C5ar1, Camk1, Capg, Capn15, Ccl12, Ccl2, Ccl24, Ccl3, Ccl7, Ccl8, Ccl9, Cd151, Cd200r1, Cd200r4, Cd22, Cd300e, Cd300lb, Cd300ld, Cd300lf, Cd302, Cd38, Cd44, Cd84, Cd93, Cdo1, Cebpa, Cebpb, Cenpb, Cfb, Ch25h, Chchd10, Cipc, Clcn7, Cldn5, Clec4a1, Clec4a3, Clec4d, Clec4e, Clec4n, Clec5a, Cln8, Cmklr1, Cndp2, Col14a1, Comtd1, Cox6a2, Cpd, Cracr2b, Crat, Creg1, Creg2, Csf1, Csf3r, Cstb, Ctnnb1, Ctps2, Ctsa, Ctsc, Ctsd, Ctsk, Ctsl, Cxcl13, Cxcl14, Cybb, Cyp4f18, Cyp4v3, Dennd4c, Dgkz, Dhrs3, Dmxl2, Dnase2a, Dnmt3aos, Dok3, Dpp7, Dse, Dtnbp1, Dtx4, Dusp6, Ear1, Ecm1, Emilin1, Emilin2, Esd, Ethe1, Ets2, F10, F13a1, F7, Fam20c, Fblim1, Fbxo32, Fcgr2b, Fcgr3, Fcgr4, Fgd4, Fn1, Fndc3b, Fnip1, Fnip2, Frrs1, Fstl1, Fth1, Fuom, Fyb, Galns, Gas2l3, Gda, Gde1, Gdf15, Gdpd1, Gla, Glmp, Gm5150, Gna12, Gng11, Gngt2, Gns, Gpnmb, Gpx1, Gpx3, Grina, Grn, Gstm1, Gstm5, Hacd4, Hcar2, Hebp1, Hexa, Hilpda, Hivep3, Hk3, Hmox1, Hp, Hpgds, Hpse, Icam2, Ier3, Igf1, Igsf6, Ikbke, Il10, Il11ra1, Il1a, Il1rn, Il6, Inhba, Irak3, Itga6, Itgb5, Klc4, Klhdc4, Klra2, Lair1, Lamp2, Ldhb, Ldlrad3, Ldlrap1, Lgals3, Lgals3bp, Lgmn, Lhfpl2, Lilra5, Lilrb4a, Lilrb4b, Lipa, Lrp1, Lrp12, Lrpap1, Ly6i, Lyz1, Maf, Mafb, Mag, Man1c1, Man2a1, Mapk6, Marchf8, Mcfd2, Mcoln3, Mertk, Metrnl, Mfsd1, Mfsd12, Mgat5, Mgll, Mgst1, Mindy1, Mitf, Mlkl, Mmp12, Mmp13, Mmp14, Mmp19, Mpp1, Mroh1, Ms4a7, Ms4a8a, Msln, Msr1, Msrb1, Mtus1, Myo1e, Myo7a, Myof, Naglu, Naip2, Nceh1, Nes, Neu1, Ninj1, Npc1, Nr1h3, Nt5e, Ntpcr, Nupr1, Olfml3, Olr1, Osm, Pald1, Paox, Pdgfa, Pdpn, Peds1, Pf4, Pgd, Pilra, Pla2g15, Pla2g7, Plac8, Plaur, Pld3, Plekhm1, Plin2, Plk3, Plod1, Plod3, Plxna1, Pmp22, Pnpla7, Pon3, Pparg, Ppargc1b, Prdm1, Prdx1, Prdx5, Prkar1b, Prtn3, Prune2, Prxl2a, Prxl2b, Ptgir, Ptgr1, Ptgs1, Ptprc, Ptrh1, Pwwp2b, Rab11fip5, Rab3gap2, Rab3il1, Rai14, Ralgds, Rcbtb2, Rffl, Rgcc, Rgl1, Rhbdf2, Rhob, Rilpl2, Rin2, Rnase4, Rnasel, Rnf128, Rnf149, S100a1, S100a4, Saa3, Samd8, Sash1, Scarb2, Sdcbp, Selenbp1, Selenop, Septin8, Serf1, Serpinb2, Serpine1, Sgk1, Siglecf, Sirpb1b, Sirpb1c, Ski, Slamf6, Slc11a1, Slc15a3, Slc16a10, Slc23a2, Slc25a37, Slc27a1, Slc36a1, Slc36a2, Slc36a4, Slc37a2, Slc38a6, Slc38a7, Slc6a8, Slc7a11, Slc7a2, Slc7a8, Slpi, Smox, Snx24, Snx27, Snx7, Soat1, Socs6, Sod2, Spink2, Spp1, Sqor, Srxn1, St3gal6, Stab1, Stra6l, Syngr1, Tarm1, Tatdn2, Tcirg1, Tcn2, Tent5c, Tex264, Tfec, Tgfbi, Thbd, Thbs1, Timp2, Tlr4, Tlr7, Tmem104, Tmem119, Tmem205, Tmem37, Tmem38b, Tmem65, Tmem86a, Tmem87b, Tnf, Tnfaip2, Tnfsf12, Tns1, Tom1, Tpcn2, Tpd52, Tpp1, Trem2, Trem3, Trib3, Trim47, Tspan32, Tspan4, Tspan5, Tst, Uap1l1, Vat1, VEGF family, Vegfa, Vegfb, Vps13c, Wfdc21, Wsb2, Zeb2, Zeb2os, Zfp120, Zfp704, Zswim6	34030460, 33577605, 30283141, 32269339, 35569056, 30848683, 32678092, 32425701, 34413303, 34389631, 34995099, 35892659, 35967301, 33599610, 33033147, 32317643, 30318149, 35724763, 36039299, 34051097, 31601718, 35920332, 25880560, 19173740, 29884181, 29593433, 27584018, 27044818, 25761875, 25447055, 24318110, 18336729, 17320037, 12960339
Mouse	Lung	Mast cell	Mcpt4, Cma1, Cpa3, Fcer1a, Tpsab1, Tpsb2	34030460, 32269339, 30318149, 31601718
Mouse	Lung	Mature B cell	Ms4a1, Tnfrsf13c	35724763
Mouse	Lung	Mature NK T cell	Nkg7, Cd38, Cd3d, Cd3e, Cxcr6, Gzmb, Klrb1b, Klrc1, Ncr1	33208946, 34939151, 33599610, 33959105, 35732116, 31601718, 29852257
Mouse	Lung	Megakaryocyte	Ppbp, Cxcr4, Gp9, Itga2b, Itgb3, Pf4	30554520, 35213222, 33079726, 33599610, 31601718, 34314387
Mouse	Lung	Mesenchymal cell	Acta2, Col1a1, Cd34, Itgam, Lgr5, Lgr6, Pdgfra, Pecam1, Ptprc, Scgb1a1, Acta1, Actc1, Adamts2, Aqp1, Aspn, Axin2, Cdh11, Clec3b, Col1a2, Cspg4, Cygb, Dcn, Dlk1, Enpp2, Epcam, Fbln1, Gata1, Gem, Gli1, Gm13305, Has1, Hba-a2, Hbb-bs, Hbb-bt, Hhip, Htra3, Ier3, Igfbp3, Igfbp4, Lum, Ly6a, P2ry14, Pdgfa, Pi16, Plat, Rbp4, Rgs2, Sbno2, Serpinf1, Sftpc, Smoc2, Tagln, Tcf21, Tgfbi, Trib1, Vcam1, Vim, Wnt2	33754492, 32425701, 35252804, 32317643, 35523183, 34808254, 34528097, 28886382, 28886383
Mouse	Lung	Mesenchymal stem cell	Ccnb2, Cd52, Cks2, Ezh2, H2afx, Hist1h2ap, Hmgb2, Hmgb3, Ly6a, Mcm5, Mcm6, Ptprc, S100a4, Ube2c, Uhrf1	34314387, 28530639, 29590628, 30802451
Mouse	Lung	Mesothelial cell	Msln, Upk3b, Wt1, Calb2, Cxcl13, Gpm6a, Lgals2, Lrrn4, Ly6g, Nkain4, Rspo1, Upk1b	34030460, 33208946, 32461220, 30848683, 32678092, 33692365, 32317643, 34151224, 31601718, 34375314, 29590628
Mouse	Lung	Microvascular endothelial cell	Foxf1	35021856
Mouse	Lung	Monocyte	Cd14, Csf1r, Ly6c2, F13a1, Cd33, Itgam, Ly6c1, Ptprc, S100a4, Arg1, Axl, Ccl3, Ccl4, Ccl9, Ccr2, Chil3, Cx3cr1, Cxcl2, Fcgr1, H2-Ab1, Ifi203, Ifitm2, Ifitm3, Irf7, Lyz2, Mrc1, Ms4a6c, Mx1, Spp1, Tgfb1, Vcan, Vegfa	33577605, 30283141, 35569056, 30848683, 30979687, 32425701, 35213222, 33692365, 35892659, 35967301, 33599610, 33033147, 30318149, 36039299, 31391335, 35675777, 34314387, 29733312
Mouse	Lung	MregDC	Ccl22, Ccr7, Il12b, 1110032F04Rik, 2200002D01Rik, 2310015A10Rik, 3010003L21Rik, 4833407H14Rik, 9330175E14Rik, 9530034E10Rik, 9530059O14Rik, A530032D15Rik, Ace, Adam11, Adam23, Adam8, Adap1, Adcy6, Adgrg6, Adora2a, Aebp2, Aftph, Agap1, Ago1, Ago3, Ahcyl2, Aldh1a2, Alkbh6, Alpk2, Amn1, Ankrd33b, Ankrd35, Anxa3, Anxa4, Apobec1, Apobec3, Apol10b, Apol7c, Apool, Aqp9, Arap2, Arc, Arf4, Arfrp1, Arhgap1, Arhgap22, Arhgap28, Arhgap31, Arhgef40, Arl5a, Arl5c, Arpin, Asl, Asprv1, Ass1, Atf5, Atl3, Atmin, Atp11a, Atrnl1, Atxn1, Atxn7l1, Auh, Avpi1, AW112010, B2m, B3gnt5, Bahd1, Basp1, Bcl2a1a, Bcl2a1b, Bcl2a1c, Bcl2a1d, Bcl2l14, Birc2, Birc3, Bmp2k, Bmt2, Bsdc1, Btg1, C130026I21Rik, C1qtnf12, C1qtnf6, C9orf72, Cacna1s, Cacnb3, Calm1, Caprin2, Capsl, Car13, Car2, Casp3, Castor1, Castor2, Cblb, Ccdc50, Ccdc6, Ccdc88a, Ccl5, Ccser2, Cd1d1, Cd200, Cd274, Cd2bp2, Cd40, Cd63, Cd70, Cd80, Cd83, Cd8a, Cdc14b, Cdc42ep2, Cdc42ep3, Cdh2, Cdk17, Cdkal1, Cdkn2a, Cdkn2b, Ceacam1, Ceacam15, Cep350, Cers6, Cflar, Chka, Chpt1, Chst7, Clec2d, Clec2i, Clic4, Clip2, Clptm1, Clu, Cmc2, Cnn2, Col27a1, Cpeb4, Cpne2, Cpsf7, Crebl2, Crem, Crispld2, Csrp1, Cstb, Cx3cl1, Cxcl1, Cxcl16, Cyria, Cyth1, Cyth3, Cytip, D330050G23Rik, Daam1, Dclre1a, Dclre1c, Ddhd1, Ddit3, Ddx6, Dennd4a, Dip2b, Dkk2, Dnah2, Dnajb2, Dnajc10, Dnajc12, Dnm1l, Dok1, Dram1, Dscaml1, Dstn, Dusp5, E130311K13Rik, Efna2, Ehd1, Emd, Eno2, Eno3, Enox2, Epb41, Epsti1, Etfdh, Etnk1, Etv3, Exoc3l4, Extl1, Fabp4, Fabp5, Fam177a, Fam32a, Fam53b, Fam89a, Fas, Fbxl18, Fbxo11, Fgfbp3, Filip1l, Flrt3, Flvcr1, Fnbp1l, Foxn2, Foxp4, Frmd4a, Fscn1, Ftl1, Ftl1-ps1, Fut4, Fxyd2, G0s2, Gadd45b, Galnt12, Gbp2, Gbp4, Gbp5, Gbp8, Gbp9, Gca, Gclc, Gdap10, Gdi1, Gfpt1, Gga2, Gga3, Ggta1, Ghitm, Gins3, Glipr2, Gm10399, Gm10851, Gm12216, Gm13546, Gm16685, Gm20342, Gm5424, Gnai3, Gnb4, Gngt2, Gnl2, Golph3l, Got1, Gpc1, Gpcpd1, Gpr132, Gpr137b, Gpr137b-ps, Gramd1b, Grk3, Gsr, Gsto1, Gstt1, Gtf2a1, Gtpbp1, Gtpbp2, Gtpbp4, Gucd1, Gyg, Gypc, Gzma, H2-Eb2, H2-K1, H2-M2, H2-Q4, H2-Q6, H2-Q7, Hdc, Hebp1, Helz2, Herc6, Hivep1, Hmgn3, Hook2, Hp, Hsf2, Hspb6, Hspbap1, Htra2, Hvcn1, Icam1, Icos, Icosl, Idh1, Idi1, Iffo2, Ifi209, Ift43, Ift57, Igsf3, Ikzf4, Il12rb2, Il15, Il15ra, Il18bp, Il1rn, Il21r, Il2ra, Il4i1, Il7r, Ilrun, Inf2, Ino80d, Inpp5b, Insl6, Ints3, Invs, Irf1, Iscu, Isg15, Itga4, Itgb1, Itgb8, Izumo4, Jag1, Jak2, Josd1, Kansl3, Kcnk6, Kdm1b, Kdm4a, Kdm6a, Kif1b, Kif21b, Klf6, Klhl8, Kpna3, Krit1, Ktn1, Lactb, Lad1, Lamp1, Laptm4b, Lima1, Lnx2, Loxl3, Lrrk1, Ltc4s, Ly75, Ly96, M1ap, Mab21l3, Map3k1, Map3k14, Map4k4, Marchf5, Marcks, Marcksl1, Mettl27, Mex3b, Mfhas1, Mical3, Micall1, Mif4gd, Mir155hg, Mllt6, Mmd, Mmp23, Mmp25, Mob3a, Mon1b, Mpi, Mreg, Mrpl14, Mrpl38, Ms4a7, Mtf1, Mthfd2, Mthfsl, Mtmr4, Mvp, Mx1, Mxd1, Mylip, Myo1g, N4bp2l1, Nabp1, Nae1, Nampt, Nans, Nav1, Ncf1, Ncoa7, Ndnf, Ndrg1, Ndrg2, Ndrg4, Net1, Nfat5, Nfe2l1, Nfil3, Nfkb2, Nfkbib, Niban3, Nipal1, Nkg7, Nlrc5, Nmnat3, Nmrk1, Nostrin, Npr1, Nr2f6, Nr4a3, Nrbf2, Nrde2, Nrg1, Nrip1, Nrp2, Nsmce3, Nsun4, Nuak2, Nub1, Nudt17, Nudt9, Nup85, Nup88, Oasl1, Ogfrl1, Osbpl8, Pakap, Papolg, Papss2, Pcbp4, Pcgf5, Pcyt1a, Pdcd1lg2, Pde4d, Pde4dip, Pdlim4, Peak1, Peli1, Pex13, Pfkfb3, Pgap2, Pgap6, Phf21a, Phlda3, Phldb1, Phlpp1, Pi4k2b, Pias3, Pik3r1, Pik3r5, Pla1a, Pla2g4f, Plek2, Plekhg2, Plekhm2, Plgrkt, Plppr4, Plxnc1, Pmvk, Pnpla8, Pnrc1, Pogk, Poglut1, Polb, Polr3c, Ppdpf, Ppp1r16a, Ppp4r2, Prnp, Procr, Prph, Prr14, Psme2, Psme2b, Psmg4, Ptdss2, Pus10, Pxmp2, Rab20, Rab21, Rab22a, Rab8b, Rab9, Rabgap1l, Rabgef1, Ralgapa2, Ramp3, Rap2b, Rasa2, Rasa4, Rasip1, Rassf2, Rassf3, Rcsd1, Rel, Relb, Renbp, Retnlg, Rftn1, Rgs1, Rhebl1, Rhoc, Ric1, Rnaset2a, Rnf115, Rnf19a, Rnf19b, Rogdi, Rora, Rpl3l, Rps27l, Rptor, Rrad, Rras2, Rubcn, Rufy3, S100a8, S100a9, Samsn1, Sav1, Sbf2, Sbno1, Scin, Scn2b, Sdhaf1, Sec22a, Sema6d, Sema7a, Sepsecs, Serinc5, Serpinb1a, Serpinb6a, Serpinb6b, Serpinb9, Sertad1, Sgpl1, Sh2d5, Sh3bp4, Sik3, Sinhcaf, Slamf1, Slc22a23, Slc25a10, Slc25a29, Slc27a3, Slc33a1, Slc38a2, Slc4a8, Slc6a6, Slc7a11, Slco5a1, Slpi, Smarce1, Smurf1, Snn, Socs1, Socs2, Sox4, Sp140, Specc1, Spib, Spint2, Spr, Spred1, Spsb1, Sqstm1, Src, Sri, Srxn1, Ssh1, St3gal3, St6galnac6, Stap2, Stard10, Stard7, Stat1, Stat3, Stat4, Stat5a, Stk4, Stoml1, Strip2, Stx11, Stxbp1, Stxbp3, Sugt1, Suox, Swap70, Syn3, Synpo2, Tamalin, Tank, Tapbpl, Tbc1d1, Tbc1d15, Tbc1d4, Tbc1d8, Tcf7, Tcf7l2, Tes, Tesc, Thap12, Thap2, Tm4sf5, Tmbim4, Tmcc3, Tmem120b, Tmem123, Tmem127, Tmem128, Tmem131, Tmem131l, Tmem140, Tmem150c, Tmem158, Tmem168, Tmem19, Tmem39a, Tmem63b, Tmtc2, Tmtc4, Tnfrsf11a, Tnfrsf1b, Tnfrsf4, Tnfrsf9, Tpm1, Traf1, Traf2, Traf3, Traf6, Trim7, Triobp, Trip10, Tsc1, Tspan3, Tspoap1, Ttll5, Tuba1a, Tubb2b, Txndc17, Uap1, Uba7, Ube2l6, Ubxn8, Umad1, Usp18, Vcam1, Vopp1, Vps13d, Vps39, Vsig10, Vti1a, Vwa5a, Washc1, Wdr48, Wnk1, Yeats2, Zc3h12c, Zc3h7b, Zdhhc18, Zfand6, Zfc3h1, Zfp296, Zfp36l1, Zfp467, Zfp524, Zfp809, Zmynd15, Zmynd8	32269339, 35675777
Mouse	Lung	Mucosal invariant T cell	Cd44, Il17a, Rorc, Sell, Zbtb16	34939151
Mouse	Lung	Myofibroblast cell	Acta2, Hhip, Myh11, Tagln, Aspn, Mustn1, Actg2, Col1a1, Fgf18, Fn1, Grem2, Jun, Junb, Ltbp2, Pdgfra, Scx, Tnc, Wif1	33208946, 31405848, 35879310, 35213222, 33692365, 34523259, 33599610, 35933397, 34151224, 31601718, 34375314, 34314387, 29590628, 28702480, 27582065, 26600197, 25047515, 24762191, 19939260, 26600239
Mouse	Lung	Naive B cell	Ighd, Sell	34135870
Mouse	Lung	Naive T cell	Ccr7, Sell, Cd44	30554520, 34965963, 35724763, 32878747
Mouse	Lung	Naive thymus-derived CD4-positive, alpha-beta T cell	Sell, Ccr7, Cd4	33959105, 35732116
Mouse	Lung	Naive thymus-derived CD8-positive, alpha-beta T cell	Sell, Ccr7, Cd8a, Dapl1, Lef1	34302042, 33959105, 35732116, 34375314
Mouse	Lung	Natural killer cell	Gzma, Nkg7, Ncr1, Gzmb, Ccl5, Klra4, Klrb1c, Klra8, Klrd1, Klre1, Klrk1, Prf1, AW112010, Cd3d, Cd3e, Cd3g, Eomes, Fasl, Fcer1g, Irf8, Itga2, Klra13-ps, Klrb1, Klrb1a, Lgals1, Ptprc, Tyrobp	34030460, 33577605, 29474909, 33208946, 35569056, 32461220, 30979687, 32678092, 30554520, 32425701, 35213222, 33692365, 34373258, 35892659, 35967301, 33599610, 35739565, 32317643, 30318149, 35724763, 35732116, 36039299, 34051097, 31601718, 31391335, 34375314, 35920332, 35675777, 34314387
Mouse	Lung	Neuroendocrine cell	Calca, Chga, Ascl1, Meg3, Nnat, Resp18	33208946, 30069044, 35627266, 25533958
Mouse	Lung	Neutrophil	S100a9, S100a8, Ly6g, Retnlg, Cxcr2, Csf3r, Itgam, Gsr, Hdc, Itgax, Lcn2, Ptprc, 4833407H14Rik, Asprv1, Car4, Ccl6, Ccr2, Cd14, Cd177, Cd24a, Cd68, Cstdc4, Cxcr4, Ednrb, F630028O10Rik, G0s2, Gcnt2, H2-Ab1, Id1, Ifitm6, Il17ra, Il1b, Il1rn, Il36a, Il36g, Itgb2, Itpr2, Lrg1, Ly6c1, Mmp8, Mmp9, Msrb1, Ngp, Pglyrp1, Siglecf, Slc31a2, Stfa2l1, Trem3, Wfdc17, Wfdc21	34030460, 33577605, 30283141, 29474909, 33208946, 32269339, 35569056, 30848683, 30979687, 30554520, 32425701, 35213222, 33692365, 34523259, 34389631, 35892659, 35739565, 32317643, 30318149, 31591573, 35724763, 36039299, 34051097, 31601718, 31391335, 34375314, 35920332, 34314387, 11591793, 23672262, 29733312
Mouse	Lung	Non-classical monocyte	Adgre4, Itgax, Treml4	34030460, 33208946, 32678092, 30554520, 31601718, 34375314
Mouse	Lung	Pericyte	Gucy1a1, Acta2, Higd1b, Notch3, Pdgfrb, Trpc6, Vtn	34030460, 33208946, 32461220, 35213222, 33692365, 33599610, 30318149, 34375314, 35722109, 26600239
Mouse	Lung	Plasma cell	Cd79a, Mzb1, Cd27, Jchain, Sdc1, Slamf7, Xbp1	34030460, 33208946, 32678092, 35892659, 35732116, 34135870
Mouse	Lung	Plasmablast	Irf4, Prdm1, Sdc1, Slpi	34161770
Mouse	Lung	Plasmacytoid dendritic cell	Bst2, Siglech, Ccr9, Klk1, Atp1b1, Cd300c, Cd8a, Cd8b1, Cox6a2, Fcrla, Gm30211, Hsd11b1, Ly6c2, Ly6d, Mzb1, Rpgrip1, Sell, Slpi, H2-Ab1, Irf5, Irf7, Ly6c1, Ms4a6c, Plac8, Ptprc	34030460, 29474909, 33208946, 32269339, 30848683, 30554520, 31601718, 35675777, 34314387, 29733312
Mouse	Lung	Pneumocyte	Sftpa1, Sftpb, Sftpc, Sftpd	32678092, 35739565, 36039299, 34375314
Mouse	Lung	Progenitor cell	Aqp5, AW112010, Ccl20, Emp2, Krt8, Ly6i, Pglyrp1, Sftpa1, Sftpd	29474909, 35627266
Mouse	Lung	Proliferating alveolar macrophage	Cdk1, Mki67, Top2a	33208946
Mouse	Lung	Proliferating fibroblast	Hmmr, Mki67, Pcna, Top2a	34151224
Mouse	Lung	Proliferating tumor-associated macrophage	H3c3, Mki67	35675777
Mouse	Lung	Pulmonary ionocyte	Ascl3, Cftr, Foxi1	34030460, 30069044
Mouse	Lung	Regulatory T cell	Foxp3, Ccr7, Cd3e, Ctla4, Itgae, Klrg1, Lck, Sell	34030460, 33208946, 34965963, 33692365, 31601718, 34375314, 32878747
Mouse	Lung	Smooth muscle cell	Acta2, Cnn1, Tagln, Enpp2, Myh11, Cyp2e1, Dpt, Fmo2, Foxf1, Hhip, Lgr6, Lum, Mustn1, Myl9, Ogn, Rgs2, Sod3, Sspn, Tpm2	34030460, 33208946, 32461220, 32678092, 30554520, 35252804, 34523259, 35892659, 35967301, 31288631, 34411694, 30318149, 31601718, 34375314, 35294950, 26600239
Mouse	Lung	Squamous epithelial cell	Krt13, Krt4	30069044
Mouse	Lung	Stromal cell	Fgf10, Hoxa5, Tcf21, Col1a1, Col3a1, Dcn, Gsn, Inmt, Pdgfrb, Acta2, Col1a2, Fn1, Gpx3, Gucy1a1, Hhip, Mgp, Myl9, Npnt, Pdgfra, Thy1	34030460, 30283141, 29474909, 31754020, 30135312, 35627266, 34314387
Mouse	Lung	T cell	Cd3d, Cd3e, Cd3g, Trbc2, Thy1, Cd28, Cd4, Cd8b1, Ctla4, Pdcd1, Sell, Trbc1, Ccr7, Cd2, Cd44, Cd6, Cd69, Cd8a, Cdk1, Dusp10, Emb, Icos, Ikzf2, Il2rb, Itgae, Lck, Lef1, Ptprc, Rora, Rpl12, S100a10, Tigit, Tnfrsf18, Trac	33577605, 29474909, 33208946, 32461220, 30979687, 34302042, 32678092, 32425701, 35213222, 33692365, 34523259, 34389631, 34373258, 35892659, 35967301, 33599610, 35739565, 33959105, 32317643, 30318149, 35724763, 35732116, 36039299, 34051097, 31601718, 31391335, 35920332, 32878747, 35675777, 34314387, 20021479, 8957199, 7908833, 7901167, 1717448
Mouse	Lung	T follicular helper cell	Bcl6, Cxcr5	34965963
Mouse	Lung	T-helper 1 cell	Ifng, Tbx21, Ccr5, Cxcr3, Il12rb2	34965963, 36039299
Mouse	Lung	T-helper 17 cell	Il17a, Rorc, Ccr5, Ccr6, Cxcr3, Il17f, Rora	34965963, 34289371, 36039299
Mouse	Lung	T-helper 2 cell	Gata3, Il4	34965963
Mouse	Lung	Tip cell	Angpt2, Apln, Cdh5, Cxcr4, Dll4, Pecam1	33754492
Mouse	Lung	Tissue-resident macrophage	C1qa, Adgre1, C1qb, C1qc, Cd24a, Cd74, Csf1r, Fcgr1, H2-Ab1, Itgam, Pf4, Ptprc, Trem2	30283141, 29474909, 33208946, 32678092, 30554520, 35213222, 33692365, 34523259, 31601718, 34375314, 29733312
Mouse	Lung	Tumor-associated macrophage	C1qa, Ccl7	35675777
Mouse	Lung	Tumor-associated neutrophil	Arg2, Cxcl1, Cxcl3, Cxcr2, Retnlg, Vcan	35675777
Mouse	Lung	Type 1 conventional dendritic cell	Xcr1	35675777
Mouse	Lung	Type 2 conventional dendritic cell	Itgax	35675777
Mouse	Lung	Type I pneumocyte	Pdpn, Ager, Akap5, Hopx, Igfbp2, Cav1, Clic5, Rtkn2, Aqp5, Cav2, Cdh1, Col4a3, Epcam, Gramd2, P2rx7, Pmp22, S100a6, Spock2	34030460, 29474909, 33208946, 33187367, 32461220, 30848683, 33960563, 30554520, 32425701, 35213222, 33692365, 32877222, 33599610, 35523183, 30318149, 35724763, 34051097, 31601718, 35627266, 34375314, 26702074, 15184050, 24739965
Mouse	Lung	Type II pneumocyte	Sftpc, Lamp3, Sftpb, Sftpa1, Etv5, Epcam, Lyz1, Lyz2, Sftpd, Slc34a2, Abca3, Bex2, Bmp4, Dkk1, Dram1, Foxa1, Foxp1, Gabrp, Id2, Lig3, Muc1, Napsa, Notch1, Rnase4, S100g, Scd1, Sfta2, Sox2, Sox9, Spry2, Thbs1, Wnt5a, Wnt7b	34030460, 30283141, 29474909, 33208946, 33187367, 32461220, 30848683, 30554520, 32425701, 35213222, 33692365, 32877222, 35892659, 33599610, 35523183, 30318149, 35724763, 34051097, 31601718, 35627266, 35996586, 9070353, 15184050, 25533958, 24739965
Mouse	Lung	Vascular associated smooth muscle cell	Acta2, Gata6, Itga8	32461220, 30848683, 34523259
Mouse	Lung	Vein endothelial cell	Vwf, Amigo2, Cdh5, Nr2f2, Pecam1, Prss23, Slc6a2, Vegfc	34030460, 33208946, 33754492, 35213222, 33692365, 32059779, 32059772