Species	Tissue	CellType	Marker	Resource
Mouse	Brain	Alternatively activated macrophage	Mrc1, Aif1, C1qb	34021242, 35653194
Mouse	Brain	Arterial smooth muscle cell	Acta2, Tagln, Cnn1, Eln, Myh11, Ptgis	35452595, 34496660
Mouse	Brain	Astrocyte	Aqp4, Gfap, Slc1a3, Aldoc, Gja1, Aldh1l1, Fabp7, S100b, Slc1a2, Htra1, Apoe, Agt, Cldn10, Clu, Atp1b2, Camsap1, Fgfr3, Gpr37l1, Ntsr2, Olig1, S1pr1, Slc6a11, Sox9, Vim, Atp1a2, Chst2, Cspg5, Cxcl14, Dio2, Eno2, Gjal, Gjb6, Gli3, Glul, Itih3, Lcat, Ndrg2, Nfia, Nwd1, Olig2, Pdpn, Pla2g7, Plpp3, Ran, Rtn1, Slc6a9, Slc7a10, Ucma	32621641, 30283141, 29474909, 35195371, 35452595, 35260865, 32183906, 31711176, 34021242, 31420995, 31574155, 33854507, 35413950, 35061297, 35858575, 34210306, 34549820, 32327974, 33243861, 35835751, 34551293, 33057193, 34488832, 34122018, 35951114, 35929805, 34496660, 34965428, 35649351, 35838338, 32744501, 31411560, 34078745, 34663959, 35051311, 33367832, 33647234, 33138917, 30858605, 35136958, 32221280, 32181251, 30625322, 32236824, 32579914, 35452605, 35675353, 31863004, 33926839, 25470350, 11455251, 29545511, 28373281, 28398520, 27689619, 29029363, 23026192, 23727388, 18510752, 21329662, 27174003, 30029554, 23047490, 22095662, 19345723, 18756519, 29483282, 18171944, 29024657, 30825797
Mouse	Brain	B cell	Cd79a, Ms4a1, Cd19, Cd79b, Igkc, Jchain, Lmo4, Ly6d, Ms4a7, Pax5, Ramp1	33782623, 35195371, 35764885, 35835751, 34551293, 35951114, 34496660, 35624211, 35051311, 35653194, 31061494
Mouse	Brain	B-1 B cell	Cd79a, Ly6d	34496660
Mouse	Brain	Bergmann glial cell	Gdf10, A2m, Nbl1, Vim	30283141, 29474909, 35260865, 29545511
Mouse	Brain	Brain capillary endothelial cell	Car4, Slc16a1, Tfrc	30283141
Mouse	Brain	Brain microvascular endothelial cell	Cldn5, Mfsd2a, Mgp, Myl9, Slc2a1	34965428, 33138917, 32221280
Mouse	Brain	Cajal-Retzius cell	Reln, Nhlh2	32727894, 35951114, 33158872, 29545511
Mouse	Brain	Capillary endothelial cell	Atp1b1, Cdkn2b, Chn2, Cldn5, Cxcr4, Ddc, Dipk1b, Fgfbp1, Flt1, Gpatch4, Gpr85, Kcnj2, Klk8, Lrrc55, Lypd1, Pcx, Pecam1, Slc1a1, Tek, Tie1	35452595, 32059779, 30188322, 33138917
Mouse	Brain	CD4-positive, alpha-beta T cell	Cd4, Il7r	35951114, 35624211
Mouse	Brain	CD8-positive, alpha-beta T cell	Cd8a, Cd8b1	35951114, 35624211, 35653194
Mouse	Brain	Cerebellar granule cell	Atoh1, Barhl1, Car10, Gabra6, Pax6, Pcp4, Vsnl1	34021242, 34210306
Mouse	Brain	Cerebral cortex neuron	Ccn2, Sla	34397382
Mouse	Brain	Choroidal cell of the eye	Ecrg4, Lcn2	32221280
Mouse	Brain	Ciliated cell	Dynlrb2, Meig1	34210306
Mouse	Brain	Classical monocyte	Ccr2, Chil3, Ly6c2, Adgre1, Csf1r	33782623, 31061494
Mouse	Brain	Conventional dendritic cell	Cacnb3, Ccr7, Cd74, Il4i1	32265666
Mouse	Brain	Cortical excitatory neuron	Neurod6	32727894
Mouse	Brain	Cortical neuroblast	Neurog2	32727894
Mouse	Brain	D1 dopamine receptor-expressing medium spiny neuron	Drd1	34663959
Mouse	Brain	D2 dopamine receptor-expressing medium spiny neuron	Drd2	34663959
Mouse	Brain	Dendritic cell	Flt3, Itgax, Zbtb46, Cd209a, H2-Aa, Itgae, Xcr1, Ccr7, Ccr9, Cd74, Ffar2, Fscn1, Irf8, Itgam, Sirpa, Zeb2	33782623, 35764885, 34551293, 34122018, 35624211, 35653194, 31061494
Mouse	Brain	Dopaminergic neuron	Slc18a2, Slc6a3, Th	31411560
Mouse	Brain	Effector CD8-positive, alpha-beta T cell	Cd8a, Cd8b1, Gzma, Prf1, Tcf7	32265666
Mouse	Brain	Endothelial cell	Flt1, Cldn5, Pecam1, Tek, Cdh5, Igfbp7, Itm2a, Ly6c1, Bmx, Bsg, Egfl7, Fn1, Slc2a1, Vwf, Abcg2, Acvrl1, Anxa1, Apoe, Atf4, Ccnb1, Cd34, Cd40, Cenpe, Col3a1, Dusp1, Efnb2, Egr1, Emcn, Eng, Epas1, Flt4, Foxc1, Gkn3, Jag1, Kdr, Kif4, Mmp3, Nos3, Nr2f2, Ocln, Pglyrp1, Pltp, Rgs5, Slc7a5, Slco1a4, Slco1c1, Tbx18, Thbd, Tie1, Timp1, Tjp1, Vcam1	34099706, 32621641, 30283141, 35195371, 35452595, 35260865, 32183906, 34021242, 33373440, 31574155, 33505428, 33854507, 35061297, 35858575, 32327974, 35835751, 33057193, 34122018, 32727894, 35951114, 35929805, 34749773, 34496660, 35649351, 35838338, 31411560, 34078745, 34663959, 35051311, 34337051, 33367832, 33647234, 30188322, 33138917, 30858605, 33997709, 32221280, 32181251, 30625322, 32236824, 35675353, 31863004, 33926839, 25788671, 29545511, 23740809, 21622182, 29024657, 26000486
Mouse	Brain	Endothelial cell of artery	Bmx, Gkn3, Fbln2, Sema3g, Col18a1, Dkk2, Eln, Hey1, Cldn5, Efnb2, Egfl8, Fbln5, Flt1, Gja4, Gja5, Igfbp3, Mgp, Msx1, Notch4, Pecam1, Sox17, Syt15, Tek, Tie1, Unc5b, Vegfc	35452595, 30988181, 32059779, 30188322, 33138917
Mouse	Brain	Endothelial cell of vascular tree	Flt1, Cldn5, Cped1, Notch3, P2ry14, Pecam1, Tek, Tie1, Vcam1, Vwf	35452595, 35413950, 32181251
Mouse	Brain	Ependymal cell	Ccdc153, Tmem212, Foxj1, Dynlrb2, Enkur, Rarres2, S100b, Acta2, Cdhr4, Clu, Dbi, Dnah11, Fam183b, Gja1, Hdc, Mia, Mt3, Nnat, Riiad1, Rsph4a, Sox9, Tm4sf1, Ttr, Ucma	29474909, 35195371, 35260865, 32183906, 31574155, 33854507, 35061297, 35858575, 30069053, 35835751, 34488832, 34122018, 35951114, 34749773, 34496660, 34965428, 31411560, 35051311, 33647234, 30625322, 29545511, 29727663
Mouse	Brain	Epithelial cell	Kl, Folr1, Ttr, Cox8b, Kcnj13, Aqp1, Atp5g1, Clic6, Enpp2, Rsph1, Sostdc1	34099706, 35195371, 35260865, 34021242, 33854507, 35061297, 34488832, 34122018, 35951114, 35649351, 33158872, 34983929
Mouse	Brain	Erythrocyte	Alas2, Hba-a1, Hba-a2, Hba-x, Hbb-bs, Hbb-bt, Hbb-y, Slc4a1	33373440, 35835751, 32727894, 30858605, 33997709
Mouse	Brain	Excitatory neuron	Slc17a7, Neurod6, Neurod2, Nrgn, Pou3f1, Satb2, Snap25, Camk2a, Cdhr1, Chat, Coro6, Cux2, Ebf3, Eomes, Fezf2, Gls, Lhx1, Lhx5, Lmx1b, Mab21l1, Mc4r, Neurod1, Nfe2l3, Nxph3, Pdzrn3, Plxna4, Reln, Rorb, Samd3, Sla, Slc17a6, Sybu, Syt1, Syt4, Th, Thy1, Tiam2, Tle4, Trp73	32869744, 30283141, 31711176, 35413950, 33243861, 33997709, 32221280, 35675353, 33926839
Mouse	Brain	Fibroblast	Dcn, Vtn, Col1a1, Lum, Pdgfra, Atp1b2, Ccn3, Col1a2, Col3a1, Fos, Gja1, Higd1b, Notch3, Pdgfrb, Rgs5	35195371, 35260865, 34021242, 34210306, 35951114, 31411560, 35051311, 34337051, 33647234, 30858605, 30625322, 31863004
Mouse	Brain	GABAergic interneuron	Lbx1, Pax2	34210306
Mouse	Brain	GABAergic neuron	Gad1, Sst, Calb1, Gad2, Meis2, Npy, Snap25, Atp1a2, Calb2, Cartpt, Cbln2, Cbln4, Col25a1, Dlk1, Gal, Meg3, Npw, Nr2f2, Nts, Otp, Rab2a, Serpini1, Slc17a7, Slc18a2, Slc32a1, Slc6a1, Tac2, Tcf4, Th	32621641, 29474909, 35195371, 34473054, 31411560, 34078745, 30858605, 32221280
Mouse	Brain	Gamma-delta T cell	Aqp3, Blk, Cd3e, Kcnk1, Rorc, Scart1	31061494
Mouse	Brain	Glial cell	Csf1r, Cx3cr1, Egfr, P2ry12, S100 family, Sox10, Sox2, Tmem119, Tnc, Trem2	31420995, 31913118, 34321664, 25149907
Mouse	Brain	Glutamatergic neuron	Gad1, Slc17a7, Gpr101, Otp, Syt2, Trh, Calca, Cbln2, Cck, Col27a1, Dlx6os1, Ebf3, Gad2, Gda, Gls, Grin1, Grp, Hcrt, Meis2, Nrgn, Pitx2, Pmch, Slc17a6, Slc17a8, Snap25, Sox11, Sst, Synpr, Tac1, Tcf4, Zic1	32621641, 35195371, 34473054, 31411560, 34078745, 30858605, 35452605
Mouse	Brain	Granule cell	Cbln1, Cbln3, Gabra6, Grm4	33926839
Mouse	Brain	Granulocyte	S100a8, Stfa2l1	29474909, 35951114, 35051311
Mouse	Brain	Helper T cell	Cd4, Ctla4, Il2ra	32265666
Mouse	Brain	Homeostatic microglial cell	Tmem119, Csf1r, Cx3cr1, P2ry12, Siglech, Sox4	35944930, 35705491, 33446504
Mouse	Brain	Immature neuron	Dcx, Neu4, Neurod1, Tubb3	34749773, 32181251, 35452605, 23727388
Mouse	Brain	Immature olfactory receptor cell	Gap43, Gng8	26541607
Mouse	Brain	Immature oligodendrocyte	Enpp6, Fyn, Mag, Olig1, Pdgfra	32621641, 30858605
Mouse	Brain	Inflammatory macrophage	Aif1, C1qa, Cd40, Il1b, Selplg, Siglech	34021242, 35653194, 29201007
Mouse	Brain	Inhibitory interneuron	Gad1, Gad2, Slc32a1, Calb1, Dlx1, Dlx2, Pvalb, Reln, Slc6a1, Snap25, Thy1, Vip	32869744, 30283141, 35413950, 33243861, 32727894, 33926839
Mouse	Brain	Intermediate progenitor cell	Hmgb2, Stmn1, Top2a	35835751, 33158872
Mouse	Brain	Interneuron	Gad1, Sst, Bcl11b, Dlx1, Dlx2, Gad2, Lhx1, Ndnf, Npy, Pnoc, Pvalb, Reln, Resp18, Slc32a1	31711176, 31420995, 31574155, 34122018, 34663959, 33997709, 35675353, 28942923
Mouse	Brain	L1 neuron	Lhx5	31711176
Mouse	Brain	L5?6 neuron	Fezf2, Tbr1	31711176
Mouse	Brain	Layer 2?4 neuron	Satb2	31711176
Mouse	Brain	Leptomeningeal cell	Gsn, Igfbp6, Mgp, Slc47a1, Slc4a10	35835751, 34488832, 35051311
Mouse	Brain	Macrophage	Ms4a7, Lyz2, Mrc1, H2-Aa, C1qa, Cd163, Cd74, Adgre1, Cx3cr1, F13a1, Fcgr1, Apoe, C1qb, C1qc, Cbr2, Ccr2, Csf1r, H2-Ab1, Ms4a6c, Tgfbi, Aif1, Cd14, Cd69, Ctsl, Cxcl10, Dock2, Emilin2, Fn1, Hp, Ifit1, Ifitm2, Isg15, Itga4, Itgam, Itgax, Ly6a, Mgl2, Ms4a6d, Nr1h3, P2ry12, Pf4, S100a11, S100a6, Sell, Spp1, Stab1, Tgfb1, Tmem119	34099706, 30283141, 29474909, 35195371, 35260865, 34622466, 35858575, 32265666, 34551293, 34488832, 34122018, 33608526, 35951114, 34749773, 34496660, 34995099, 35649351, 35624211, 31411560, 35051311, 35653194, 31061494, 30858605, 29545511, 30687011
Mouse	Brain	Mast cell	Cpa3, Fcer1a	33782623, 35764885, 35624211
Mouse	Brain	Mature granule cell	Col6a1, Necab3, Penk, Rgs4	35977861
Mouse	Brain	Mature NK T cell	Cd3e, Klrb1c, Ncr1	35653194, 31061494
Mouse	Brain	Mature olfactory receptor cell	Omp	26541607
Mouse	Brain	Mature oligodendrocyte	Mog, Mag, Olig1, Opalin, Gjc2, Mbp, Snap25	32621641, 30283141, 31411560, 30858605
Mouse	Brain	Megakaryocyte	Ppbp	35951114
Mouse	Brain	Mesenchymal cell	Col3a1, Dcn, Pdgfra, Pdgfrb	31411560
Mouse	Brain	Microglial cell	Tmem119, P2ry12, Cx3cr1, Aif1, C1qa, Itgam, Hexb, Ccl4, Ctss, Siglech, Sall1, Apoe, C1qb, C1qc, Ccl3, Cd68, Csf1r, Cst7, Fcer1g, Fos, Lpl, Adgre1, Btg2, Ccl12, Cd53, Cd74, Cd9, Crybb1, Ctsb, Ctsl, Fcgr3, Fcrls, Ifi27l2a, Irf7, Jun, Klf2, Ly86, Mki67, Olfml3, P2ry13, Ptprc, Selplg, Tnf, Top2a, Trem2, Ank, Bst2, Ccl2, Ccl6, Cd52, Cd63, Cd83, Cenpf, Clec7a, Cst3, Ctsd, Cxcl10, Dcn, Dock2, Egr1, F13a1, Fcgr1, Flt1, Fth1, Gpr34, Grn, H2-Ab1, Hba-a1, Hmox1, Ifit2, Ifit3, Ifit3b, Ifitm3, Il1b, Isg15, Junb, Jund, Lcp1, Lgals3, Lgals3bp, Lpcat3, Lrp8, Lum, Lyz2, Mcoln3, Mfsd10, Mir6236, Mpeg1, Mrc1, Nfkbia, Plpp2, Pros1, S100a8, S100a9, Sirpa, Slc30a5, Slco4a1, Smad7, Sparc, Spp1, Stab1, Stat1, Trappc10, Tuba1a, Tubb5, Tyrobp	34099706, 30283141, 29474909, 35195371, 35452595, 35260865, 35710983, 35764885, 32183906, 31711176, 31574155, 33114694, 33854507, 35413950, 35061297, 35858575, 34210306, 32327974, 33243861, 35835751, 34551293, 33057193, 34488832, 34122018, 33608526, 32727894, 35951114, 35929805, 35944930, 34749773, 34496660, 34965428, 35649351, 35624211, 31411560, 34663959, 35051311, 35653194, 34881090, 34337051, 33367832, 33647234, 33446504, 33138917, 30858605, 33997709, 35136958, 32221280, 32181251, 30625322, 32236824, 32579914, 35675353, 31863004, 33926839, 11455251, 23832717, 29545511, 18510752, 28398520, 26290874, 27174003, 30029554, 24090101, 29024657, 29727663, 30825797, 30687011
Mouse	Brain	Microvascular endothelial cell	Foxq1, Pglyrp1, Slc2a1	35021856
Mouse	Brain	Migratory DC	Cacnb3, Ccr7, Flt3, Nudt17, Zbtb46	31061494
Mouse	Brain	Monocyte	Ccr2, Ly6c2, Plac8, Ear2, F13a1, H2-Aa, Ace, Cd14, Cd74, Chil3, Cxcl2, Ear1, Eno3, Fcgr1, Fn1, H2-Ab1, H2-Eb1, Itgam, Ly6i, Lyz2, Mgl2, Mrc1, Ms4a7, Tgfbi, Thbs1	34099706, 33782623, 35260865, 35764885, 35835751, 32265666, 33608526, 35951114, 34496660, 35051311, 35653194, 31061494, 35705491, 25830951
Mouse	Brain	Monocyte-derived dendritic cell	Cd74, H2-Aa, H2?Aa, Ifitm1, Il1b	32265666, 35051311
Mouse	Brain	Myeloid suppressor cell	S100a8	35653194
Mouse	Brain	Natural killer cell	Gzma, Ncr1, Klrb1c, Nkg7, Car2, Eomes, Ifng, Klrd1, Klre1, Klrk1, Nktr, Prf1, S100a1	33782623, 35764885, 32265666, 34551293, 35951114, 34496660, 35624211, 35051311, 35653194, 31061494
Mouse	Brain	Neural crest cell	Crabp1	32727894
Mouse	Brain	Neural progenitor cell	Dcx, Arx, Ccnd2, Ascl1, Dlx2, Hes5, Npc2, Olig2, Pax6, S100a6	30283141, 35260865, 34488832, 32727894, 35929805, 24115312
Mouse	Brain	Neuroblast (sensu Vertebrata)	Dcx, Ccnd2, Dlx1, Neurod1, Sox11, Acvr2a, Btg1, Celf4, Crmp1, Dbn1, Dchs1, Dlx2, Dlx5, Dlx6, Eya2, Fgf10, Fgf3, Fgf8, Foxc1, Fxyd6, Fzd10, Hes5, Hmgb2, Isl1, Jag2, Meis2, Nav3, Ncam1, Neurog1, Neurog2, Notch1, Olfm1, Pfn2, Pou3f3, Six1, Sox5, Stmn2, Top2a	34122018, 32744501, 34663959, 30625322, 26235341, 19436318, 24768691, 26000486, 29727663
Mouse	Brain	Neuron	Snap25, Meg3, Rbfox3, Map2, Syt1, Nrgn, Tubb3, Cartpt, Eno2, Ndrg4, Pcp4, Prlr, Snhg11, Sst, Syn1, Aif1, Atp1b1, Cck, Chat, Crh, Elavl2, Foxp2, Gfap, Gnpnat1, Kif1a, Kif5a, Lhx5, Lmo3, Mafb, Meis2, Nefh, Nefm, Nes, Nfasc, Nos1, Npy, Nr2f2, Nts, Pdyn, Penk, Prkcd, Rbfox1, Rbfox2, Rprm, Scn7a, Slc12a5, Slc14a1, Slc17a6, Slc17a7, Stmn2, Syp, Tcf4, Zic1	34099706, 32869744, 29474909, 35452595, 35260865, 32183906, 31711176, 33854507, 35061297, 35858575, 31913118, 34397382, 34551293, 33057193, 34122018, 35951114, 34965428, 35649351, 31411560, 34663959, 35051311, 33113347, 33647234, 30858605, 32181251, 30625322, 32236824, 35452605, 35675353, 33926839, 33176134, 29545511, 28597398, 28336359, 26470785, 26359103, 16650608, 25523827, 19345723, 29024657
Mouse	Brain	Neuronal stem cell	Ccnd2, Dcx, Hmgb2, Meg3, Ndrg4, Snap25, Snhg11, Sox11	33854507, 34965428, 30625322
Mouse	Brain	Neutrophil	S100a9, Ly6g, S100a8, Retnlg, Camp, Cd14, Cxcl12, Il1b, Ly6c2, Ngp	35195371, 35835751, 34551293, 35624211, 35653194, 31061494
Mouse	Brain	NG2-glia cell	F11r	20184779
Mouse	Brain	Non-classical monocyte	Ace, Adgre1, Csf1r, Ear2, Eno3	33782623, 31061494
Mouse	Brain	Olfactory bulb interneuron	Dcx, Dlx5, Gad1, Sp8	32234482
Mouse	Brain	Olfactory ensheathing cell	Frzb, Mybpc1	35260865, 34749773, 29545511
Mouse	Brain	Olfactory receptor cell	Adcy3, Ano2, Cnga2, Cnga4, Cngb1, Gnal, Ncam1, Neurog1, Omp	26839357
Mouse	Brain	Olfactory unsheathing cell	Gfap, Ngfr, Ran, S100b	33926839
Mouse	Brain	Oligodendrocyte	Mbp, Mog, Plp1, Olig1, Mobp, Olig2, Opalin, Mag, Pdgfra, Sox10, Cldn11, Cnp, Cspg4, Car2, Cntn1, Enpp2, Enpp6, Ptgds, Trf, C3, C4b, Cd9, Cspg5, Ermn, Fabp7, Fyn, Gpr17, Hapln2, Igtp, Klk6, Mal, Neat1, Nfasc, Serpina3n, Tnfaip6, Vcan	29474909, 35195371, 35452595, 35260865, 32183906, 31711176, 34021242, 31574155, 33854507, 35413950, 35061297, 35858575, 34210306, 35835751, 34551293, 33057193, 34488832, 34122018, 35951114, 35929805, 34496660, 34965428, 35649351, 35838338, 34473054, 31411560, 34078745, 34663959, 35051311, 34337051, 33647234, 32221280, 32181251, 30625322, 32236824, 32579914, 35452605, 35675353, 31233341, 31863004, 33926839, 11455251, 29545511, 28695768, 23727388, 29024657, 29727663, 30825797
Mouse	Brain	Oligodendrocyte precursor cell	Pdgfra, Olig1, Gpr17, C1ql1, Cspg4, Sox10, Bmp4, Cspg5, Fyn, Lhfpl3, Neu4, Olig2, Tnr, Vcan, Cdo1, Epn2, Lingo1, Nfasc, Pdgfa, Pdgfb, Pdgfc, Pdgfd, S100b, Sox8, Susd5	32621641, 30283141, 29474909, 35195371, 35452595, 35260865, 32183906, 33854507, 35413950, 35061297, 35858575, 33243861, 34122018, 35951114, 34749773, 34965428, 35649351, 31411560, 34078745, 34663959, 35051311, 33647234, 32221280, 32234482, 30625322, 35675353, 33926839, 29545511, 23939222, 29024657
Mouse	Brain	Peptidergic neuron	Cartpt, Postn, Ucn	31411560
Mouse	Brain	Pericyte	Vtn, Kcnj8, Pdgfrb, Rgs5, Abcc9, Cspg4, Anpep, Mcam, Acta2, Atp13a5, Cd248, Des, Notch3, Zic1, Ace2, Apod, Cald1, Dcn, Dlk1, Mrc1, Mylk, Pf4, Snap25	34099706, 30283141, 35195371, 35452595, 35260865, 33854507, 35858575, 35835751, 32727894, 35951114, 34965428, 31411560, 33251489, 33446504, 33138917, 30858605, 30625322, 32236824, 35675353, 25788671, 26891660, 24510880, 18212066, 12598306, 16807374, 15459006
Mouse	Brain	Pituicyte	Nkx2-1	33373440
Mouse	Brain	Plasmacytoid dendritic cell	Siglech, Ccr9, Pacsin1, Flt3, Irf8, Itgax, Ly6c2, Ly6d, Runx2	32265666, 35624211, 35653194, 31061494
Mouse	Brain	Platelet	Pecam1	33373440
Mouse	Brain	Progenitor cell	Ascl1, Dlx1, Sp9, Alcam, Bst1, Btg2, Cd200, Dlx2, Gsx2, Hes6, Msi1, Msi2, Olig2, Peg3, Procr, Prom1, Prop1	33373440, 34749773, 33158872, 33138917, 32234482, 22166264, 26541607
Mouse	Brain	Proliferating oligodendrocyte	Cspg4, Olig1, Pdgfra	30858605
Mouse	Brain	Purkinje cell	Calb1, Pcp4	31863004, 33926839, 2298941
Mouse	Brain	Pyramidal neuron	Fibcd1, Neurod6, Pou3f1, Satb2, Smim43, Sox11, Spink8, Tbr1	31574155, 32234482
Mouse	Brain	Radial glial cell	Hes1, Pax6, Aldoc, Ccn1, Eomes, Gas1, Nes, Aspm, Ednrb, Hes5, Mfap4, Nde1, Nhlh1, Pkmyt1, Plk1, Slc1a3, Sox2, Sstr2, Tcf19, Tk1, Unc5d, Dbi, Fabp7, Fos, Gli3, Id4, Mif, Mt1, Mt2, Neurog2, Prom1, Tnc, Vim	33158872, 33997709, 32234482, 35452605, 24662373, 20151365
Mouse	Brain	Regulatory T cell	Cd4, Foxp3, Il2ra	33782623, 35764885, 35624211, 35653194
Mouse	Brain	Schwann cell	Ttr	29474909, 35051311
Mouse	Brain	Sensory neuron	Omp	33926839
Mouse	Brain	Serotonergic neuron	Fev, Slc18a2, Slc6a4, Tph2	31411560
Mouse	Brain	Smooth muscle cell	Acta2, Myh11, Myl9, Tagln, Rgs5, Ckb, Cnn1, Des, Dstn, Gper1, Gpr20, Mustn1, Pcp4l1, Pln, Rgs4, Sorbs2, Sparcl1, Tpm2, Wtip	35195371, 34122018, 35951114, 34496660, 31411560, 34411694, 32236824, 29545511
Mouse	Brain	Spiral ganglion neuron	Map2	31913118
Mouse	Brain	Stem cell	Nes, Gfap, Msi1, Msi2, Sox2	33373440, 30069053, 24992594, 23147111
Mouse	Brain	T cell	Cd3e, Cd3d, Cd3g, Ccl5, Cd2, Ms4a4b, Bcl11b, Birc5, Cd160, Cd4, Lat, Ms4a4a, Ms4a4c, Ms4a4d, Ms4a6b, Nkg7, Stmn1, Ube2c	33782623, 35195371, 35764885, 35835751, 32265666, 34496660, 34965428, 35051311, 35653194, 31061494, 33446504, 32181251
Mouse	Brain	Tanycyte	Col23a1, Crym, Ptn, Slc16a2, Thrsp	34549820
Mouse	Brain	Tip cell	Mcam, Plaur, Adm, Serpine1, Angpt2, Apln, Cd82, Chst1, Dll4, Esm1, Fscn1, Lamb1, Mmrn2, Nid1, Nid2, Nrp1, Oaf, Pcdh17, Pde4b, Pfkfb3, Plk2, Sirpa, Trp53i11	30988181, 30188322, 33138917
Mouse	Brain	Tissue-resident macrophage	Mrc1, Cd163, Cd74, Pf4	35452595, 34965428, 35624211
Mouse	Brain	Transit amplifying cell	Ccnd2, Hmgb2, Sox11	30625322
Mouse	Brain	Tumor-associated macrophage	Tgfbi	33782623, 35764885
Mouse	Brain	Type 1 spiral ganglion neuron	B3gat1, Btbd9, Calb1, Calb2, Ccdc155, Cd164l2, Cd24a, Edil3, Elovl5, Eno1, Faim2, Kcnc3, Lgals1, Lypd1, Maf, Mdga1, Nefl, Ntng1, Obscn, Paxbp1, Pcdh20, Pcsk2, Pou4f1, Rasgrp2, Rph3a, Scn4b, Sema3e, Sphkap, Tagln3, Ttn, Tubb3, Zfp804a	30078709, 30078710
Mouse	Brain	Type 2 spiral ganglion neuron	Gata3, Mafb, Prph, Th	30078709, 30078710
Mouse	Brain	Vascular associated smooth muscle cell	Adamts16, Art3, Cald1, Car4, Ephx3, Higd1b, Rgs5, Tagln, Vtn	35452595, 34496660, 34965428, 35649351, 30625322
Mouse	Brain	Vascular leptomeningeal cell	Col1a2, Slc6a13	34749773, 34965428, 29545511
Mouse	Brain	Vein endothelial cell	Adh1, Car14, Ccl19, Ephb4, Nr2f2, Ackr1, Adgrg6, Casp12, Cdk6, Clec14a, Cutal, Flrt2, Fmo1, Gpr182, Hs3st1, Lbp, Ldb2, Mafb, Mmrn1, Nrp2, Pcp4l1, Ptgis, Slc38a5, Vwf	30988181, 32059779, 30188322, 33138917