Species	Tissue	CellType	Marker	Resource
Human	Brain	Alternatively activated macrophage	CD163, MRC1, ATF3, CLEC7A, CXCL2, CXCL8, MS4A4A, MSR1, SGK1, TGFB1, VEGFA, VSIG4	34805184, 35653194, 36111134, 32915415, 35173760, 21737148
Human	Brain	Astrocyte	GFAP, AQP4, SLC1A2, ALDOC, APOE, GLUL, S100B, ALDH1L1, GJA1, SLC1A3, SOX9, AGT, C1orf61, C5AR1, CD40, CD80, CD86, FGFR3, GRAMD2B, HOPX, MLC1, NFIA, SLC4A4, ABCA1, ACSL6, ADAM28, ADCYAP1R1, ADGRV1, ALDH1A1, ANLN, AQP1, ARHGEF26, ATF3, ATP13A4, ATP1B2, BBOX1, BMPR1B, BTG2, C16orf89, CA12, CASQ1, CASTOR1, CBS, CDC42EP4, CHRDL1, CHST9, CLU, COL23A1, CPE, CPNE5, CPVL, CRYAB, CST3, CTH, CYBRD1, CYFIP1, DAND5, DBI, DGKG, DKK3, DNASE2, DOK5, DTNA, EDNRB, EEPD1, EFEMP1, EGLN3, EPAS1, EZR, F3, FABP7, FOS, FOSB, FTH1, FXYD7, GABRB1, GADD45B, GJB6, GLI3, GLIS3, GPR75, GRIA1, GUSBP1, HDAC2-AS2, HEPACAM, HEPN1, HES1, HEY1, HGF, HIF1A, HIF3A, HLA-E, HNMT, HSPB8, ID1, ID4, IER2, IGFBP7, IL11RA, IL33, ITGA7, ITGB4, JUN, JUNB, JUND, KCNH7, KCNIP2, KCNJ10, KIF21A, L1CAM, LCAT, LCN2, LHFPL6, LINC01748, LIX1, LPL, LRIG1, LRRC8A, LYPD1, MAFB, METTL7A, MMD2, MT1X, MT2A, MTHFD2, NANOG, NDRG2, NFKBIA, NHSL1, NKAIN4, NME3, NRP1, NT5C, NTRK2, NTSR2, NWD1, OBI1-AS1, P2RY1, PAPLN, PAQR6, PAX3, PEA15, PER1, PFKFB3, PIEZO1, PLTP, PON2, PPP1R3C, PRLHR, PRRT2, PSAP, RASL10A, RASSF4, RFX4, RGMA, RHOB, RND3, RNF43, SCG2, SCG3, SEMA6A, SERPINA3, SF3A1, SLC14A1, SLC30A10, SLC39A11, SLC6A11, SORCS2, SORL1, SPARCL1, SPOCK1, SPON1, SRPX, SSTR2, ST6GAL2, TACR1, TBC1D10A, TIMP3, TMEM151B, TNC, TNS1, TOB2, TPCN1, TRIL, TRIM66, TSC22D4, TSPAN12, VIM, WIF1, ZFAND5, ZFP36, ZFP36L1, ZFP36L2	32997994, 35236372, 35226341, 35260865, 33241205, 32051547, 34671548, 34374948, 32961131, 33257666, 33390587, 33192286, 35681503, 36054938, 34473054, 32976581, 32641768, 35735919, 32051591, 35416251, 35327982, 35210419, 34616070, 30041684, 29674595, 36111134, 35688820, 32253265, Company, 27314618, 28336567, 26295203, 12417106, 27587997, 27806376, 26060301
Human	Brain	B cell	CD79A, MS4A1, CD79B, HLA-DRA, IGKC, MZB1, CD19, CD74, CST7, CXCL13, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DQB3, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HSP90AA1, HSPA2, HSPA8, HSPE1, IGHG1, IGHG3, IGHM, LTB, MS4A7, MT-ND3, NCL, NEAT1, PTPRC, S100A9, TCL1A	33782623, 34671548, 32961131, 33749664, 34804058, 34805184, 33257666, 34077540, 34228647, 35653194, 35534852, 36111134, 18825001
Human	Brain	Blood-brain barrier endothelial cell	ABCC4, ABCG2, ADGRA2, CDH5, CLDN1, CLDN12, CLDN3, CLDN5, CTNNB1, LSR, OCLN, PGP, SLC16A1, SLC22A8, SLC2A1, SLC5A1, SLCO1A2, TJP1, TJP2, TJP3, TNFRSF19, TNFRSF21	35534852
Human	Brain	Border associated macrophage	APOE, CD163, MRC1, MS4A7, STAB1	35534852
Human	Brain	Brain microvascular endothelial cell	CLDN5	34616070
Human	Brain	Cajal-Retzius cell	RELN	33723434
Human	Brain	CD1c-positive myeloid dendritic cell	HLA-DRA, S100A9	33749664
Human	Brain	CD4-positive, alpha-beta T cell	CD4	34881489
Human	Brain	CD8-positive, alpha-beta cytotoxic T cell	CD8A, CD8B, GZMB, NKG7, PRF1, ZNF683	35534852
Human	Brain	CD8-positive, alpha-beta T cell	APOE, AQP4, CD3D, CD3E, CD3G, CD44, CD8A, CHI3L1, FABP7, GNLY, GZMK, IL7R, MBP, MOG, NES, PTPRZ1, S100A10, S100A9, SOX10	33749664, 34804058, 35653194, 34881489, 35416251
Human	Brain	Central memory T cell	CCR7, KLF2, LEF1, SELL, TCF7	35534852
Human	Brain	Cerebral cortex neuron	BCL11B, TBR1, CUX1, POU3F2, SATB2, SOX5	33470930, 34686776
Human	Brain	Circulating monocyte	CCR2	33192286
Human	Brain	Classical monocyte	CD14, FCN1, VCAN	33782623
Human	Brain	Conventional dendritic cell	H4C3, HMGB2, STMN1	34671548
Human	Brain	Cortical upper layer neuron	SATB2, CUX1, CUX2	33723434, 33470930, 34686776
Human	Brain	Dendritic cell	CD1C, HLA-DPB1, FCER1A, HLA-DPA1, HLA-DQB1, HLA-DRA, ITGAX, CD74, CLEC10A, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DQA1, HLA-DQA2, HLA-DQB2, HLA-DQB3, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, AXL, CCL22, CCR7, CD5, IDO1, IL3RA, LAD1, NRP1, RAMP1, SIGLEC6, THBD	33782623, 34671548, 34804058, 34077540, 34228647, 35653194, 35723032, 35416251, 35534852, 36111134
Human	Brain	Dopaminergic neuron progenitor	CORIN, DCX, EN1, FOXA2, LMX1A, NR4A2, OTX2, PITX3, TH	35964138
Human	Brain	Effector memory CD4-positive, alpha-beta T cell	IL7R	35534852
Human	Brain	Effector memory CD8-positive, alpha-beta T cell	CD8A, CD8B, IL7R	35534852
Human	Brain	Endothelial cell	CLDN5, PECAM1, VWF, CDH5, FLT1, APOLD1, KDR, A2M, CD34, TM4SF1, VCAM1, ABCB1, APLNR, ATP10A, BMX, CLEC1B, ESAM, FAM167B, FN1, ITM2A, NOS3, NOSTRIN, PALMD, PTPRB, RGS5, SELE, VTN	32997994, 33723434, 35236372, 35260865, 33241205, 32961131, 34737447, 34228647, 35245443, 35681503, 36054938, 32976581, 33729480, 35416251, 33542154, 35534852, 36111134, 35688820, 16141364, 14579932, 12777073, 26060301, 30808879
Human	Brain	Endothelial cell of vascular tree	COL3A1, IFITM1, ISLR	35327982
Human	Brain	Ependymal cell	AQP4, FOXJ1	32051591, 35210419, 32670003
Human	Brain	Ependymocyte	AK7, CCDC153	35688820
Human	Brain	Epithelial cell	EPCAM, PTPRO, TTR	35964138, 33542154
Human	Brain	Erythrocyte	HBA1, HBB	33723434, 33257666, 33192286
Human	Brain	Excitatory neuron	SLC17A7, CAMK2A, LINC00507, NEUROD2, NRGN, SATB2, ACOT7, ADCYAP1, AEBP2, B4GALNT3, BCL11B, BTBD9, CARTPT, CCDC30, CCN2, CHRM3-AS2, CNTN3, COL22A1, COL5A1, DYNC2I1, EGR3, EXTL2, FAM153A, FAM153CP, GOLGB1, GPR26, HTR2C, IFNG-AS1, IGSF9B, MDFIC, MIPOL1, MKX, MLLT3, MRAP2, NEFM, NEUROD1, NEUROD6, NKTR, NPSR1-AS1, NRG3, NTNG2, OTOGL, PGAP4, PLAGL1, PLCH1, POSTN, PPP1R1A, PRDM8, PTER, RAB27B, RANBP17, RANBP2, RBBP6, RHOBTB2, RNR1, ROS1, SCHLAP1, SDK2, SEMA3A, SLA, SLC12A8, SLC17A6, SMYD1, STARD4-AS1, SYNPO, SYT6, TADA1, TPBG, TRABD2A, TSHZ2, TTC37, TUBA4A, UQCRHL, VWA2, ZYX	35236372, 35260865, 33241205, 34671548, 34737447, 35681503, 32976581, 34912114, 34616070
Human	Brain	Fenestrated endothelial cell	ESM1, NRP1, PLPP1, PLPP3, PLVAP, RGCC	35534852
Human	Brain	Fibroblast	COL1A2, COL1A1, ACTA2, COL3A1, DCN, LUM, MYL9, TAGLN	35260865, 35534852, 33470930
Human	Brain	GABAergic interneuron	DLX2, GABBR1, GABBR2, GAD1, GAD2, PBX3	35688820
Human	Brain	GABAergic neuron	GAD1, GAD2	34473054, 33470930
Human	Brain	Glial cell	GFAP, S100 family, FABP7, NFIB, PTPRZ1, S100A1, S100A10, S100A11, S100A12, S100A13, S100A14, S100A15A, S100A16, S100A2, S100A3, S100A4, S100A5, S100A6, S100A7, S100A7A, S100A7L2, S100A7P1, S100A7P2, S100A8, S100A9, S100B, S100G, S100P, S100Z, SOX2, VIM	32051547, 34228647, 34912114, 35327982, 36111134, 2175869
Human	Brain	Glutamatergic neuron	SLC17A6, SLC17A7, FEZF2, GLS, GRIN1, GRIN2B, LAMP5, LTK, RORB, THEMIS	35688820, 17651422
Human	Brain	Granule cell	CCDC175, FAT2, FHIP1A, RAB37, RIMS1	34473054, 32976581
Human	Brain	Granulocyte	CLC, HLA-DRA, S100A9	33749664
Human	Brain	Homeostatic microglial cell	ADGRG1, CX3CR1, GPR183, GPR34, P2RY12, P2RY13	34054860
Human	Brain	Immune oligodendrocyte	HLA-A, HLA-B, HLA-C	35735919
Human	Brain	Inflammatory macrophage	CD86, IL1B, TSPO, CCL2, CCL3, CCL4, CXCL16, IRF5, NOS2, PTGS2, TNF	34805184, 35653194, 36111134, 32915415, 35173760, 28968465
Human	Brain	Inhibitory interneuron	GAD1, GAD2, DLX2, DLX6-AS1, GABBR2, MYBPC1, NPY, PENK, PVALB, SLC32A1, SST, TAC1	33723434, 35236372, 35260865, 33241205, 35681503, 34912114
Human	Brain	Intermediate progenitor cell	EOMES, PPP1R17	33723434, 34737447, 33158872, 34912114, 34616070
Human	Brain	Interneuron	GAD1, CXCL14, TACR1, ABI3BP, ADAMTS5, ANKH, ARHGAP36, BMP2, BMP3, CA3, CASC3, CHRNA2, CHRNA7, CLIP4, COL15A1, CPLX3, DLX5, DUSP4, EPM2AIP1, ETFB, GLT8D2, KLF5, LRP12, MC4R, MEPE, MYO5B, NDNF, NMBR, NMU, NPNT, PPIP5K2, PPP1CB, PRELID2, PVALB, RBP4, SCGN, SLIT2, SST, TAFA4, TMEM255A, TRIM13, VIP	34671548, 32976581, 34616070
Human	Brain	Lipid droplet-accumulating microglia cell	CD9	34301296
Human	Brain	Macrophage	CD68, CD163, C1QA, APOC1, APOE, C1QB, C1QC, CD14, HLA-DQA2, HLA-DQB2, ITGAM, ITGAX, TGFBI, AIF1, ANKRD28, ASPM, AURKB, B2M, CCR5, CD74, CD80, CD86, CDCA3, CXCL1, CXCL2, CXCL3, CXCL8, DSE, F13A1, FCAR, GPNMB, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DQB3, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, LYZ, MKI67, MRC1, MS4A7, MT1G, PTPRC, RNASE1, S100A8, S100A9, TREM2, TYROBP, VCAN	32997994, 35226341, 34671548, 34692159, 34434898, 34805184, 33664747, 34228647, 36054938, 35653194, 32051591, 35327982, 35534852, 32915415, 35173760, 35688820, 18825001, 28987033, 24405578, 29262845
Human	Brain	Mast cell	GATA2, HPGDS, KIT, SERPINB9, ST14	33782623, 35245443, 35534852
Human	Brain	Mature neuron	BCL11B, MAP2	33723434, 33470930
Human	Brain	Mature oligodendrocyte	MAG, PLP1	35735919
Human	Brain	Medium spiny neuron	PITX3, SLC6A3	35688820
Human	Brain	Memory T cell	CD69, IL7R, NR4A2	35534852
Human	Brain	Mesenchymal cell	CHI3L1, LUM, ACTA2, ADM, ALX1, CD44, COL1A1, COL1A2, DCN, RGS5	33723434, 36054938, 35416251, 35534852
Human	Brain	Mesenchymal stem cell	CD44, ENG, NT5E, THY1	29590646
Human	Brain	Microglial cell	CX3CR1, P2RY12, AIF1, CSF1R, TMEM119, C1QA, CD74, C1QB, C1QC, C3, CCL4, CD14, P2RY13, BIN1, CCL3, DOCK8, GPR34, HLA-DRA, IFIT3, LAPTM5, PTPRC, SALL1, ADORA3, ADRB2, APBB1IP, APOD, BCL2A1, BHLHE41, CCL2, CD163, CD68, CD83, CHI3L1, CNP, CSF2RA, CST3, CTSS, CYR61, CYTL1, EGR3, F13A1, FN1, GPR183, GRN, HEXB, HLA-DPA1, IFI27, IFNGR1, IGFBP7, ITGAM, ITGAX, KLF2, MEF2A, MKI67, MMP25, MMP9, MT2A, MX1, MX2, NAV3, POSTN, RHOB, RNASET2, RSAD2, SIGLEC8, SLC1A2, SLC1A3, SPARCL1, SPRY1, TAL1, TIMP1, TK1, TNR, TREM2, TYROBP	33207193, 32997994, 33723434, 35236372, 35260865, 35710983, 33241205, 34692159, 32961131, 35413115, 34434898, 34737447, 33257666, 34077540, 33192286, 34228647, 35245443, 35681503, 35838338, 36054938, 34473054, 32976581, 35653194, 35723032, 35735919, 32051591, 35327982, 35210419, 34616070, 35534852, 29674595, 35688820, 18825001, 26060301, 29262845
Human	Brain	Migratory DC	CCR7, LAMP3, SAMSN1	33782623
Human	Brain	Monocyte	S100A9, VCAN, CD14, FCN1, HLA-DRA, LYZ, S100A8, C1QA, C1QC, CD74, CD86, CSF1R, EMILIN2, FCAR, FGR, GPNMB, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DQB3, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, LGALS3, RNASE1, THBS1, TYMP	33782623, 35226341, 34692159, 33749664, 34077540, 35653194, 35723032, 35534852, 36111134
Human	Brain	Mueller cell	DKK3, SOX9	32051547
Human	Brain	Myeloblast	LYZ	35245443
Human	Brain	Myeloid dendritic cell	CST3, HLA-DPA1, HLA-DQB1	34671548
Human	Brain	Myeloid suppressor cell	S100A8	35653194
Human	Brain	Naive T cell	CCR7, KLF2, LEF1, SELL, TCF7	35534852
Human	Brain	Natural killer cell	NKG7, GNLY, GZMB, KLRD1, PRF1, KIR2DL1, KIR2DL3, KIR2DL4, KIR2DS4, KIR3DL1, KIR3DL2, KIR3DL3, KLRF1, NKTR	35226341, 33749664, 34804058, 34077540, 35653194, 35534852, 36111134
Human	Brain	Neural progenitor cell	SOX2, DCX, NGFR, PAX6, TOP2A, ADGRG1, CD24, CENPF, DPYSL3, GFAP, GLI3, HMGB2, NCAM1, NES, NEUROD1, SLITRK6, VIM	32051547, 35245443, 36054938, 32976581, 24604282, 25514637, 25843934, 19525879, 21275797
Human	Brain	Neurecto-epithelial cell	KLF4, VCAN, VIM	32051547
Human	Brain	Neuroblast (sensu Vertebrata)	CD24, DCX, STMN2	30041684
Human	Brain	Neuron	MAP2, DCX, RBFOX3, ENO2, DCLK3, GFAP, MARK4, NES, STMN2, SYP, SYT1, TUBB3, ARMH4, BCL11B, C1QL2, CACNG5, CALB1, CDO1, CNTN4, COBL, CRX, CTNNA2, DCN, DKK3, DLX1, DLX2, DLX5, DLX6, DLX6-AS1, DPYSL5, ELAPOR1, ELAVL2, ELAVL4, GAP43, GLRA2, GNB3, GNGT1, GRIA1, GRIA3, GRIK4, HSPA1A, HSPA1B, KCNK1, KDR, KIF5A, L1CAM, LNX1, LRRTM3, MAN1A1, MEF2C, MHC class I, NEFM, NELL1, NEUROD6, NFASC, NR4A2, NRL, NRXN1, NXPH1, PCP4, PNOC, POU3F1, PRKCD, PROX1, RALGAPA1, RBFOX1, RCVRN, RELN, RGS14, SATB2, SCGN, SIPA1L1, SLC10A4, SLC17A6, SLITRK1, SNAP25, SST, SYT4, TBR1, TLE4, TMEM130, WFS1	32997994, 33723434, 35226341, 32051547, 33749664, 33390587, 33192286, 35245443, 29727680, 35327982, 35210419, 34616070, 36111134, 33470930, 22605579, 28877758, 24142904, 16973293, 9809557, 26093165, 27587997, 26060301
Human	Brain	Neutrophil	CXCR2, MPO, S100A8, CCR7, CD163, CD177, CEACAM8, CSF3R, FCGR3B, FPR2, IL1R2, ITGAM, ITGAX, LYZ, MMP25, S100A12, S100A9, SELL, THBS1	35226341, 34692159, 34077540, 34228647, 35090578, 35653194, 36111134, 18825001
Human	Brain	Non-classical monocyte	CDKN1C, FCGR3A, FCN1	33782623
Human	Brain	Oligodendrocyte	MBP, PLP1, MOG, MAG, OLIG1, OLIG2, APOD, CLDN11, CNP, OPALIN, MOBP, ERMN, GPR37, KLK6, PDGFRA, RTN4, ACAT2, ACTG1, ADAMTS4, AFAP1L2, AMOTL2, ANGPTL2, APBB1IP, ARHGAP23, ARL4A, ASIC1, ASPA, ATCAY, ATP5F1E, AVEN, BCAN, BIN1, C2orf27A, C5orf64, CCP110, CDH13, CDHR1, CDK18, CHRM5, COX7C, CRB1, CRYAB, CSPG4, CXADR, DAAM2, DHCR24, DHCR7, DLL1, DLL3, DPYD, EBP, EEF1B2, EEF2, EIF3E, EIF3L, EPN2, FA2H, FABP7, FAM222A-AS1, FAU, FDPS, FERMT1, FGFBP3, FXYD6, GALC, GALNT5, GAP43, GBP1, GBP2, GJB1, GPR17, GPR37L1, GRIA2, GRIA4, GRIK2, GRM3, GSN, HIP1, HIPK2, IFIT2, IFITM10, ISG20, JAKMIP2, KCNH8, KCNIP3, KLRC2, LDHB, LGI3, LHFPL3, LILRB1, LIMA1, LIMS2, LMF1, LPAR1, LRRC75A, LRRN1, MAL, MAML2, MAP1A, MAP2, MAP6D1, MARCKSL1, MEGF11, MEST, MICAL1, MIF, MTSS1, MYRF, MYT1, NACA, NAP1L1, NEU4, NME1, NME2, NPM1, NPPA, NXPH1, OMG, OPCML, P2RX7, PALM2, PCDH15, PGRMC1, PHACTR3, PHLDA1, PHLDB1, PID1, PLEKHB1, PLLP, PLPPR1, POLR2F, PPP1R14A, PTGDS, RAB2A, RAB33A, RACK1, RASGEF1B, RBFOX3, RGMB, RGR, RPL13A, RPL31, RPS17, RPS2, RPS23, RPSAP58, RTKN, SCD, SEC14L5, SERINC5, SGK1, SHC4, SHD, SHISA4, SIRT2, SLC1A1, SNX1, SNX22, SOX8, TAGLN3, TCF12, TF, THY1, TM7SF2, TMEFF2, TMEM97, TMSB10, TMSB4X, TNK2, TRAF4, TUBB, TUBB3, TUBB4A, UGT8, UQCRB, VIPR2, WSCD1, ZCCHC24, ZDHHC9, ZEB2	31958186, 32997994, 35236372, 35226341, 35260865, 33241205, 34671548, 34692159, 34805184, 33390587, 33192286, 35681503, 36054938, 34473054, 32976581, 32641768, 32051591, 35416251, 35327982, 34616070, 30041684, 29674595, 36111134, 32041837, 35688820, 32253265, 18515322, 27596440, 26110560, 27806376, 26060301
Human	Brain	Oligodendrocyte precursor cell	PDGFRA, OLIG1, OLIG2, SOX10, CSPG4, PCDH15, DLL3, VCAN, SIRT2, TNR, ALCAM, APOD, ASCL1, ATP1B1, BAMBI, C1orf61, C1QL1, CDO1, CLDND1, CMTM5, CTHRC1, CTSO, DBNDD2, DUSP6, EPN2, ETV1, GPNMB, GPR17, GPR37L1, HES6, IGFBP2, ITM2C, KLK6, LHFPL3, LINC00937, MBP, MEG3, MEGF11, MROH9, MYT1, NCALD, NES, NEU4, PCDH9, PHLDA1, PLLP, PON2, PPP1R14A, PTN, PTPRZ1, RAB40B, RGCC, S100B, SCD5, SCRG1, SERPINE2, SLC8B1, SOX6, SPRY4, SPSB4, STMN4	31958186, 35236372, 35260865, 33241205, 34671548, 34374948, 32961131, 34737447, 35245443, 35681503, 36054938, 34473054, 32976581, 32641768, 35735919, 35327982, 35210419, 34616070, 30041684, 29674595, 35688820, 27105664, 18281150, 26060301
Human	Brain	Pericyte	PDGFRB, RGS5, CD248, ABCC9, AMBP, CD19, CSPG4, KCNJ8, ABCA9, ACTA2, AGRN, ANPEP, AOC3, COX4I2, EDNRA, FN1, FOXF2, HIGD1B, NOTCH3, P2RY14, PDE5A, PTH1R	33723434, 35236372, 33241205, 32961131, 34228647, 35245443, 32976581, 25360079, 24418464
Human	Brain	Peripheral nervous system neuron	PRPH	33470930
Human	Brain	Plasma cell	IGHG3, DERL1, FKBP11, IGHA1, IGHG1, IGHG4	33782623, 34671548, 35534852
Human	Brain	Plasmacytoid dendritic cell	GAS5, IGLC2, IL32, IL3RA, LILRA4	33782623, 34671548
Human	Brain	Progenitor cell	EOMES, SOX2, EGFR, PAX6, VIM, ALCAM, ASCL1, CENPF, GFAP, ID3, MKI67, NES, NEUROG2, NGFR, SOX10, TOP2A	33723434, 34374948, 35210419, 32670003, 33470930, 35688820, 22166264
Human	Brain	Purkinje cell	CLMP, EML5, MPRIP, TFAP2B, TMEM117	32976581, 15805417
Human	Brain	Radial glial cell	HOPX, SOX2, FABP7, HES1, PDGFD, CRYAB, FAM107A, LIFR, PAX6, SLC1A3, TNC, ANXA1, ANXA2, APOE, ASCL1, CD38, CXCL12, EGFR, FEZF1, GLI3, GPX3, HMGB2, MT1E, NES, PDGFRB, TCF7L2, TMEM47, VIM	33723434, 32051547, 34671548, 34374948, 35964138, 33158872, 35210419, 32670003, 34616070
Human	Brain	Regulatory T cell	CD4, IL2RA, CCR8, FOXP3, STAT5B, TGFB1	33782623, 36111134, 26667180
Human	Brain	Retinal ganglion cell	NEFL, NEFM, PCP4	32051547
Human	Brain	Sensory neuron	FGF3, GAL, ISL1, NTRK2, PHOX2B, PIEZO2, POU4F1, PRPH, SCN9A, SSTR2, TAC1	33470930
Human	Brain	Stem cell	SOX2, CDKN1C, CORO1A, H3P47, LGR5, NANOG, NES, NFIA, PAX6, POU5F1, PROM1, SOX1, SOX11	35210419, 33470930, 32041837, 32253265, 25451725, 24113065
Human	Brain	T cell	CD3D, CD3E, CD3G, CD2, IL32, PTPRC, CD8A, GZMH, GZMK, ICOS, IL2RB, IL7R, PRF1	34671548, 34692159, 33749664, 34434898, 34805184, 33257666, 34077540, 34228647, 35653194, 32051591, 35416251, 36111134, 32041837, 18825001, 29618649, 10533727
Human	Brain	T-helper 1 cell	CCR6, CXCR3, IFNG, STAT1, STAT4, TBX21, TNF	36111134, 26667180
Human	Brain	T-helper 17 cell	CCR6, CXCR3, IL17A, STAT3	36111134, 26667180
Human	Brain	T-helper 2 cell	CCR6, CXCR3, TNFRSF8, GATA3, IL13, STAT5A, STAT6	36111134, 26667180, 12396479
Human	Brain	Tanycyte	GJA1, RAX	35688820
Human	Brain	Tumor-associated endothelial cell	BGN, COL1A2	36054938
Human	Brain	Tumor-associated macrophage	C1QA, ADAM8, AIF1, ARG2, BHLHE40, CCL2, CD14, CD68, CD74, CD93, CIB1, CIITA, CREM, CSF1R, CXCL8, CYBB, CYRIA, CYTH1, DOK3, DSE, EMB, FGR, FOSL2, FPR3, FXYD5, GPR132, GPR65, HLA-DMB, HLA-DQA1, HLA-DRA, HLA-DRB5, IFITM2, IL10, IL1RN, IQGAP1, ITGA4, KYNU, LYZ, MAFB, METRNL, MS4A6A, MS4A7, MXD1, NFIL3, PDE4B, PIM1, PLAC8, PLBD1, PLTP, PTPN7, S100A11, SAMHD1, SH3BGRL, SLC66A3, SPINT2, SPP1, SYNGR2, TGFBI, THBD, TMEM123, TNFSF13, TREM1, VOPP1	33782623, 35669791, 36111134, 32041837
Human	Brain	Type 1 conventional dendritic cell	CADM1, CLEC9A, XCR1	33782623
Human	Brain	Type 2 conventional dendritic cell	CD1C, CLEC10A, FCER1A	33782623
Human	Brain	Vascular associated smooth muscle cell	ACTA2	32961131
Human	Brain	Vascular leptomeningeal cell	DCN, LUM, OGN	35688820